Alternatives and similar repositories for enrichplot:

Users that are interested in enrichplot are comparing it to the libraries listed below

• YuLab-SMU / ChIPseeker
  ChIP peak Annotation, Comparison and Visualization
  ☆234Updated last month
• SingleR-inc / SingleR
  Clone of the Bioconductor repository for the SingleR package.
  ☆185Updated last month
• kevinblighe / E-MTAB-6141
  Data from Lewis, Barnes, Blighe et al., Cell Rep. 2019 Aug 27; 28(9): 2455–2470.e5.
  ☆119Updated 4 years ago
• rcastelo / GSVA
  Gene set variation analysis
  ☆212Updated this week
• compbiomed / singleCellTK
  Interactively analyze single cell genomic data
  ☆182Updated last month
• broadinstitute / ssGSEA2.0
  Single sample Gene Set Enrichment analysis (ssGSEA) and PTM Enrichment Analysis (PTM-SEA)
  ☆270Updated 5 months ago
• HelenaLC / muscat
  Multi-sample multi-group scRNA-seq analysis tools
  ☆182Updated last month
• hbctraining / Intro-to-DGE
  ☆192Updated this week
• satijalab / sctransform
  R package for modeling single cell UMI expression data using regularized negative binomial regression
  ☆221Updated 3 months ago
• samuel-marsh / scCustomize
  R package with collection of functions created and/or curated to aid in the visualization and analysis of single-cell data using R.
  ☆247Updated this week
• BorchLab / scRepertoire
  A toolkit for single-cell immune profiling
  ☆328Updated this week
• saezlab / decoupleR
  R package to infer biological activities from omics data using a collection of methods.
  ☆231Updated last week
• alserglab / fgsea
  Fast Gene Set Enrichment Analysis
  ☆393Updated this week
• OSCA-source / OSCA
  The package wrapping the book, for deployment via the Bioconductor build system.
  ☆83Updated 4 months ago
• dtm2451 / dittoSeq
  Color blindness friendly visualization of single-cell and bulk RNA-sequencing data
  ☆197Updated 5 months ago
• BorchLab / escape
  Easy single cell analysis platform for enrichment
  ☆165Updated this week
• constantAmateur / SoupX
  R package to quantify and remove cell free mRNAs from droplet based scRNA-seq data
  ☆266Updated 2 years ago
• stemangiola / tidybulk
  Brings bulk and pseudobulk transcriptomics to the tidyverse
  ☆171Updated this week
• satijalab / seurat-data
  Dataset distribution for Seurat
  ☆135Updated 2 weeks ago
• IOBR / IOBR
  IOBR is an R package to perform comprehensive analysis of tumor microenvironment and signatures for immuno-oncology.
  ☆233Updated last week
• noriakis / ggkegg
  Analyzing and visualizing KEGG information using the grammar of graphics
  ☆225Updated last month
• enblacar / SCpubr
  Generate high quality, publication ready visualizations for single cell transcriptomics data.
  ☆178Updated last month
• dviraran / SingleR
  SingleR: Single-cell RNA-seq cell types Recognition (legacy version)
  ☆289Updated 4 years ago
• pwwang / scplotter
  scplotter is an R package that is built upon plotthis. It provides a set of functions to visualize single-cell sequencing data in an easy…
  ☆142Updated this week
• smorabit / hdWGCNA
  High dimensional weighted gene co-expression network analysis
  ☆385Updated last week
• PoisonAlien / TCGAmutations
  R data package for pre-compiled somatic mutations from TCGA cohorts and CCLE
  ☆92Updated 5 months ago
• jokergoo / EnrichedHeatmap
  make enriched heatmap which visualizes the enrichment of genomic signals to specific target regions.
  ☆190Updated last year
• RGLab / MAST
  Tools and methods for analysis of single cell assay data in R
  ☆232Updated last year
• velocyto-team / velocyto.R
  RNA velocity estimation in R
  ☆186Updated last year
• crazyhottommy / scATACseq-analysis-notes
  my notes for scATACseq analysis
  ☆122Updated 11 months ago