Alternatives and similar repositories for enrichplot

Users that are interested in enrichplot are comparing it to the libraries listed below

• kevinblighe / E-MTAB-6141
  Data from Lewis, Barnes, Blighe et al., Cell Rep. 2019 Aug 27; 28(9): 2455–2470.e5.
  ☆121Updated 5 years ago
• YuLab-SMU / ChIPseeker
  ChIP peak Annotation, Comparison and Visualization
  ☆243Updated 2 weeks ago
• alserglab / fgsea
  Fast Gene Set Enrichment Analysis
  ☆423Updated last week
• SingleR-inc / SingleR
  Clone of the Bioconductor repository for the SingleR package.
  ☆197Updated last month
• rcastelo / GSVA
  Gene set variation analysis
  ☆230Updated last week
• noriakis / ggkegg
  Analyzing and visualizing KEGG information using the grammar of graphics
  ☆235Updated last month
• jokergoo / EnrichedHeatmap
  make enriched heatmap which visualizes the enrichment of genomic signals to specific target regions.
  ☆198Updated last year
• HelenaLC / muscat
  Multi-sample multi-group scRNA-seq analysis tools
  ☆211Updated 2 weeks ago
• saezlab / decoupleR
  R package to infer biological activities from omics data using a collection of methods.
  ☆273Updated 8 months ago
• tidyomics / tidybulk
  Brings bulk and pseudobulk transcriptomics to the tidyverse
  ☆174Updated last week
• dtm2451 / dittoSeq
  Color blindness friendly visualization of single-cell and bulk RNA-sequencing data
  ☆205Updated last month
• compbiomed / singleCellTK
  Interactively analyze single cell genomic data
  ☆184Updated last month
• SGDDNB / ShinyCell
  Shiny Interactive Web Apps for Single-Cell Data
  ☆199Updated 6 months ago
• hbctraining / Intro-to-DGE
  ☆209Updated 3 months ago
• ShixiangWang / sigminer
  🌲 An easy-to-use and scalable toolkit for genomic alteration signature (a.k.a. mutational signature) analysis and visualization in R htt…
  ☆157Updated 2 months ago
• Olink-Proteomics / OlinkRPackage
  Olink R package: A collection of functions to facilitate analysis of proteomic data from Olink. The goal of this package is to help users…
  ☆121Updated last week
• BorchLab / escape
  Easy single cell analysis platform for enrichment
  ☆197Updated 2 weeks ago
• pwwang / scplotter
  scplotter is an R package that is built upon plotthis. It provides a set of functions to visualize single-cell sequencing data in an easy…
  ☆242Updated this week
• cxli233 / SimpleTidy_GeneCoEx
  A simple gene co-expression analyses workflow powered by tidyverse and graph analyses
  ☆209Updated 2 months ago
• stephenturner / annotables
  R data package for annotating/converting Gene IDs
  ☆166Updated 4 months ago
• zhangyuqing / ComBat-seq
  Batch effect adjustment based on negative binomial regression for RNA sequencing count data
  ☆198Updated 5 years ago
• csoneson / ARMOR
  Light-weight Snakemake workflow for preprocessing and statistical analysis of RNA-seq data
  ☆165Updated last month
• OSCA-source / OSCA
  The package wrapping the book, for deployment via the Bioconductor build system.
  ☆95Updated last year
• junjunlab / GseaVis
  An implement R package to visualize GSEA results
  ☆195Updated 2 months ago
• kevinblighe / EnhancedVolcano
  Publication-ready volcano plots with enhanced colouring and labeling
  ☆439Updated last year
• BCCHR-trainee-omics-group / StudyGroup
  This is where TOG houses all of its workshop scripts, as well as details on its upcoming workshops and seminars.
  ☆44Updated last year
• satijalab / sctransform
  R package for modeling single cell UMI expression data using regularized negative binomial regression
  ☆241Updated 6 months ago
• omarwagih / ggseqlogo
  Publication-quality sequence logos in R
  ☆225Updated last year
• samuel-marsh / scCustomize
  R package with collection of functions created and/or curated to aid in the visualization and analysis of single-cell data using R.
  ☆279Updated this week
• dviraran / xCell
  Cell types enrichment analysis
  ☆204Updated last year