owensgl / haploblocksLinks
Scripts and resources for the haploblocks manuscript
☆18Updated 5 years ago
Alternatives and similar repositories for haploblocks
Users that are interested in haploblocks are comparing it to the libraries listed below
Sorting:
- ☆18Updated 3 years ago
- Repository for the 2017 Genome Biology publication, "The interplay of demography and selection during maize domestication and expansion"☆17Updated 5 years ago
- Likelihood-based Selective Sweep Detection☆40Updated 2 years ago
- ☆18Updated 2 years ago
- Scripts of population genomics analysis☆36Updated 7 years ago
- R package to draw syntenic plots in 3 different styles☆42Updated 4 months ago
- Infer demographic history with the Moran model☆50Updated 6 months ago
- Scripts to handle NGS data and other biological data☆22Updated last year
- Scripts for population genetics analysis☆20Updated 3 years ago
- Leroy & Rougemont - “learning-by-doing” introduction to population genomics - scripts☆21Updated 6 years ago
- Scripts to analyze data using TreeMix. This pipeline runs TreeMix with bootstrapping, helps choose number of migration events and creates…☆40Updated last year
- ☆12Updated 6 years ago
- The IntroBlocker ancestry inference algorithm☆17Updated 2 years ago
- scripts for the project of seven thaliana genomes assembly☆42Updated 4 years ago
- The GitHub repository for the A. thaliana pan-NLR'ome project.☆18Updated 6 years ago
- Tutorial on using popular tools for learning about population history☆53Updated 7 years ago
- A quick user guide for de novo transposable element (TE) library generation and TE screening. Utilising; the Extensive de novo TE Annotat…☆27Updated 3 years ago
- Pan-genome Construction and Population Structure Variation Calling pipeline☆45Updated last year
- ☆16Updated last year
- A pipeline to use Lep-Map3 to create linkage maps and LepAnchor for anchoring and orienting genome assemblies with said linkage maps.☆14Updated 6 months ago
- A simple program for evaluate the assembly of a give genome.☆18Updated 2 years ago
- A shiny application to visualize MCscan result☆38Updated 3 years ago
- Analyses of sex chromosome evolution in songbirds☆16Updated 6 years ago
- DFOIL: Introgression Testing for Five Taxa☆33Updated 4 years ago
- ☆44Updated last year
- Bulked-Segregant Analysis using vcf file with or without parents☆31Updated last year
- Files for the the Physalia course on Population genomic inference from low-coverage whole-genome sequencing data, Oct 10-13, 2022☆69Updated 2 months ago
- Population genetics analyses from NGS data☆26Updated 4 years ago
- Distinguishing among modes of convergent adaptation using population genomic data: statistical inference method, extensions, and examples☆13Updated 6 years ago
- A haplotype analysis toolkit for natural variation study.☆31Updated 2 years ago