simonhmartin / tutorialsLinks
Tutorials on evolutionary genomics
☆46Updated 3 years ago
Alternatives and similar repositories for tutorials
Users that are interested in tutorials are comparing it to the libraries listed below
Sorting:
- MSMC2 Scripts☆27Updated 2 weeks ago
- Scripts to analyze data using TreeMix. This pipeline runs TreeMix with bootstrapping, helps choose number of migration events and creates…☆37Updated last year
- Tutorial about R package PopGenome☆43Updated 6 years ago
- Quantifying Introgression via Branch Lengths☆54Updated 3 years ago
- Hybridization detection using phylogenetic invariants☆49Updated 11 months ago
- R functions for generating site frequency spectra (SFS) from a VCF file.☆28Updated 5 years ago
- Tutorials on phylogenomic analyses for the ForBio Phylogenomics course☆37Updated last year
- ☆45Updated 2 years ago
- A shiny application to visualize MCscan result☆37Updated 3 years ago
- Useful bioinformatic scripts☆58Updated 10 months ago
- A quick user guide for de novo transposable element (TE) library generation and TE screening. Utilising; the Extensive de novo TE Annotat…☆27Updated 2 years ago
- Tutorials on phylogenetic and phylogenomic inference☆49Updated 5 months ago
- A collection of scripts for working with Hi-C data, Juicebox, and other genomic file formats☆69Updated 4 years ago
- An accessible and flexible tool for fitting demographic models with dadi using custom or published models (available here), conducting go…☆66Updated last year
- Topology weighting by iterative sampling of sub-trees☆81Updated 9 months ago
- Presentations from the course☆38Updated 2 years ago
- A organelle de novo genome assembly toolkit☆69Updated 7 months ago
- SambaR: Snp datA Management and Basic Analyses in R☆30Updated last month
- ☆36Updated last year
- TSEBRA: Transcript Selector for BRAKER☆48Updated 10 months ago
- use long sequenced reads to close gaps in assemblies☆39Updated 7 years ago
- a Semi-automated pipeline for assembling T2T genome☆23Updated last month
- Few scripts facilitating the extraction of info from Repeat Masker .out files☆83Updated 4 years ago
- G-PhoCS is a software package for inferring ancestral population sizes, population divergence times, and migration rates from individual …☆34Updated 4 years ago
- Identification of errors in draft genome assemblies with single-base pair resolution for quality assessment and improvement