HuffordLab / Wang_et_al._Demography
Repository for the 2017 Genome Biology publication, "The interplay of demography and selection during maize domestication and expansion"
☆17Updated 3 years ago
Related projects ⓘ
Alternatives and complementary repositories for Wang_et_al._Demography
- Scripts and resources for the haploblocks manuscript☆14Updated 4 years ago
- ☆11Updated 5 years ago
- Scripts for Wang et al (2020) Evidence for widespread selection in shaping the genomic landscape during speciation of Populus.☆11Updated 4 years ago
- scripts for the project of seven thaliana genomes assembly☆38Updated 3 years ago
- ☆16Updated 2 years ago
- Selection outlier scan with population branch statistic☆13Updated 9 months ago
- ☆16Updated last month
- Scripts for Shi et al. (2024). The suer-pangenome of Populus unveils genomic facets for its adaptation and diversification in widespread …☆11Updated 7 months ago
- Automated pipeline for running CoalHMM☆11Updated 11 months ago
- Bulked-Segregant Analysis using vcf file with or without parents☆23Updated 7 months ago
- ☆21Updated 2 years ago
- Centromics: visualing centromeres with multiple omics data☆22Updated 2 weeks ago
- Scripts to analyze data using TreeMix. This pipeline runs TreeMix with bootstrapping, helps choose number of migration events and creates…☆23Updated 8 months ago
- VCF2Dis: A new simple and efficient software to calculate p-distance matrix and construct population phylogeny based Variant Call Format☆27Updated 2 months ago
- Likelihood-based Selective Sweep Detection☆35Updated last year
- Codes for the lettuce resequencing project in 2020☆26Updated 3 years ago
- Analyses of sex chromosome evolution in songbirds☆15Updated 5 years ago
- Main scripts and commands used to analyze goat population genetic and domestication☆17Updated 5 years ago
- Pan-genome Construction and Population Structure Variation Calling pipeline☆33Updated 2 months ago
- Working on cotton resequencing☆11Updated 4 years ago
- Scripts of population genomics analysis☆34Updated 6 years ago
- Centromics: visualing centromeres with multiple omics data☆17Updated 10 months ago
- ☆24Updated 3 years ago
- scripts☆15Updated 6 years ago
- Scripts that used in our chicken T2T manuscript.☆19Updated last year
- ☆24Updated 7 years ago
- Tutorial on using popular tools for learning about population history☆49Updated 6 years ago
- Methods and recipes for Plant Genome Annotation - Transposable Elements☆18Updated last year
- Killifish genomics scripts☆12Updated 3 years ago
- ☆22Updated 2 months ago