Alternatives and similar repositories for mapcomp:

Users that are interested in mapcomp are comparing it to the libraries listed below

• kristinmlee / dmc
  Distinguishing among modes of convergent adaptation using population genomic data: statistical inference method, extensions, and examples
  ☆13Updated 5 years ago
• simonhmartin / dfs
  D Frequency Spectrum: Signatures of introgression across the allele frequency spectrum
  ☆16Updated 4 years ago
• LohseLab / gIMble
  A genome-wide IM blockwise likelihood estimation toolkit
  ☆16Updated 8 months ago
• champost / ABLE
  ABLE - Approximate Blockwise Likelihood Estimation
  ☆17Updated 6 years ago
• millanek / fineRADstructure
  A package for population structure inference from RAD-seq data
  ☆31Updated 3 years ago
• evolgenomics / haplotagging
  Code and binaries related to processing haplotagging data
  ☆14Updated 2 years ago
• tplinderoth / ngsParalog
  Copy number variation detection using NGS data.
  ☆14Updated last year
• whitlock / OutFLANK
  A procedure to find Fst outliers based on an inferred distribution of neutral Fst
  ☆19Updated 5 years ago
• owensgl / haploblocks
  Scripts and resources for the haploblocks manuscript
  ☆15Updated 4 years ago
• sjoleary / SNPFILT
  ☆18Updated 7 years ago
• mojaveazure / angsd-wrapper
  Utilities for analyzing next generation sequencing data
  ☆17Updated 6 years ago
• GenisGE / evalAdmix
  ☆12Updated 10 months ago
• mfumagalli / ngsPopGen
  Population genetics analyses from NGS data
  ☆25Updated 4 years ago
• GLBRC / sppIDer
  a tool to identify species and inter-species hybrids and chromosome copy number variants from short-read data
  ☆17Updated 5 years ago
• thierrygosselin / assigner
  Population assignment analysis using R
  ☆17Updated 4 months ago
• owensgl / reformat
  Scripts for reformatting data. Mainly from tab separated to an esoteric program specific format
  ☆13Updated 2 weeks ago
• MorrellLAB / BAD_Mutations
  Deleterious mutation prediction pipeline
  ☆13Updated 2 months ago
• StevenMicheletti / poolparty
  Whole-genome bioinformatic pipeline for pooled or individual-based NGS data using bash and R
  ☆20Updated 3 years ago
• ngthomas / microhaplot
  microhaplotype visualizer and analyzer
  ☆18Updated 3 years ago
• Rosemeis / pcangsd
  Framework for analyzing low depth NGS data in heterogeneous populations using PCA.
  ☆49Updated last month
• avaughn271 / AdmixtureBayes
  ☆20Updated 5 months ago
• augusto-garcia / onemap
  Repository created to host the R package OneMap: software for constructing genetic maps in experimental crosses: full-sib, RILs, F2 and b…
  ☆37Updated last year
• hemstrow / snpR
  ☆30Updated this week
• omys-omics / triangulaR
  Calculate Hybrid Index and Heterozygosity from SNP data
  ☆10Updated 3 months ago
• mmatschiner / F4
  Assessing confidence in introgression among four populations
  ☆27Updated 3 years ago
• LynchLab / MAPGD
  A program for the Maximum-likelihood analysis of population genomic data.
  ☆28Updated 3 years ago
• malthesr / winsfs
  Site frequency spectrum estimation based on window expectation-maximisation algorithm
  ☆13Updated last year
• pimbongaerts / radseq
  Collection of Python scripts for parsing/analyses of RAD-seq data
  ☆22Updated last week
• Tom-Jenkins / utility_scripts
  Scripts for population genetics analysis
  ☆19Updated 2 years ago
• ThomasTaus / poolSeq
  Analyze and simulate Pool-Seq time series data
  ☆15Updated 2 years ago