☆19Jan 24, 2018Updated 8 years ago
Alternatives and similar repositories for SNPFILT
Users that are interested in SNPFILT are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Population Genomics in R workshop☆13Mar 24, 2024Updated 2 years ago
- This repository contains the code and manual for the R package delimitR.☆17Apr 19, 2022Updated 4 years ago
- method for modeling continuous and discrete population genetic structure☆39Updated this week
- ☆37Dec 28, 2021Updated 4 years ago
- Distinguishing among modes of convergent adaptation using population genomic data: statistical inference method, extensions, and examples☆14May 1, 2019Updated 7 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Scripts to analyze data using TreeMix. This pipeline runs TreeMix with bootstrapping, helps choose number of migration events and creates…☆48Mar 7, 2024Updated 2 years ago
- a bash pipeline for RAD sequencing☆55Jan 27, 2025Updated last year
- A framework for simulation-based inference in evolutionary biology☆28Jan 13, 2026Updated 7 months ago
- ☆16Jun 14, 2017Updated 9 years ago
- ☆21Oct 2, 2024Updated last year
- ☆18Jun 30, 2023Updated 3 years ago
- Scripts and resources for the haploblocks manuscript☆18Mar 20, 2020Updated 6 years ago
- ☆13Aug 18, 2023Updated 2 years ago
- Suit of R-scripts to perform landscape genomic analyses☆15May 25, 2020Updated 6 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- General purpose population genetics software☆18Jul 15, 2019Updated 7 years ago
- LDkit: a parallel computing toolkit for linkage disequilibrium analysis☆19Sep 4, 2020Updated 5 years ago
- Importing and Analysing DArT type snp and silicodart data☆36Mar 27, 2025Updated last year
- Here is the material for a workshop series about biostatistics in R. Topics will include data management, a lot of (generalized) linear (…☆12Feb 21, 2019Updated 7 years ago
- GONE: Scripts, programs and an example data set☆57May 12, 2026Updated 3 months ago
- An automated workflow for processing ddRADseq data using Stacks v2.4. Starts with sequencer files, and ends with various input files for …☆10Apr 25, 2024Updated 2 years ago
- Main scripts and commands used to analyze goat population genetic and domestication☆19Mar 25, 2019Updated 7 years ago
- Topology weighting from unphased genotypes of any ploidy☆30Updated this week
- ☆24Mar 15, 2026Updated 5 months ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- Calculation of pairwise Linkage Disequilibrium (LD) under a probabilistic framework☆52Nov 13, 2023Updated 2 years ago
- Converts a VCF file to a FASTA alignment provided a reference genome and a GFF file☆55Dec 15, 2025Updated 8 months ago
- A tool to infer species tree and phylogenetic network from multilocus data☆32Jul 2, 2020Updated 6 years ago
- Bayesian analysis of genomic sequence data under the multispecies coalescent model☆114Jul 27, 2026Updated 2 weeks ago
- ☆16Mar 20, 2023Updated 3 years ago
- Estimating Effective Migration Surfaces☆112Oct 28, 2023Updated 2 years ago
- Sex assignment through coverage☆20May 23, 2025Updated last year
- cross-species analysis of cell identities, markers and regulations☆13Jul 11, 2025Updated last year
- Fast gradient-based optimization of resistance surfaces☆17Jul 9, 2020Updated 6 years ago
- GPUs on demand by Runpod - Special Offer Available • AdRun AI, ML, and HPC workloads on powerful cloud GPUs—without limits or wasted spend. Deploy GPUs in under a minute and pay by the second.
- Interactive assembly and analysis of RAD-seq data sets☆82Mar 3, 2026Updated 5 months ago
- Increased efficiency in identifying mixed pollen samples by meta-barcoding with a dual-indexing approach - Computational methods☆10Jan 19, 2022Updated 4 years ago
- filtering SNPs based on LD and HWE status☆10Jul 3, 2023Updated 3 years ago
- R Package for performing Qst-Fst analyses☆21Nov 14, 2017Updated 8 years ago
- SambaR: Snp datA Management and Basic Analyses in R☆33Jul 9, 2026Updated last month
- Demographic analysis of Brassica oleracea☆10May 19, 2026Updated 2 months ago
- 📅 simple raw-text ascii calendar☆19Jun 3, 2026Updated 2 months ago