sjoleary / SNPFILTLinks
☆18Updated 7 years ago
Alternatives and similar repositories for SNPFILT
Users that are interested in SNPFILT are comparing it to the libraries listed below
Sorting:
- ☆13Updated 8 years ago
- Repository for speciation genomics website☆25Updated 11 months ago
- A package for population structure inference from RAD-seq data☆31Updated 4 years ago
- ☆26Updated 2 years ago
- Scripts for population genetics analysis☆20Updated 2 years ago
- Population assignment analysis using R☆17Updated 2 months ago
- SambaR: Snp datA Management and Basic Analyses in R☆28Updated last month
- Scripts to analyze data using TreeMix. This pipeline runs TreeMix with bootstrapping, helps choose number of migration events and creates…☆35Updated last year
- Software for ancestry estimation in unrelated individuals☆20Updated 2 weeks ago
- UCE Bioinformatics Pipeline☆16Updated 7 months ago
- Leroy & Rougemont - “learning-by-doing” introduction to population genomics - scripts☆20Updated 5 years ago
- Scripts and resources for the haploblocks manuscript☆16Updated 5 years ago
- ☆18Updated last year
- Tutorial about R package PopGenome☆41Updated 6 years ago
- GONE: Scripts, programs and an example data set☆48Updated last year
- Genome-wide de novo genotyping with 2bRAD☆23Updated last month
- R package for analysis of hybrids and hybrid zones☆21Updated last year
- This repository contains the code and manual for the R package delimitR.☆17Updated 3 years ago
- Calculate Hybrid Index and Heterozygosity from SNP data☆10Updated 2 months ago
- Whole-genome bioinformatic pipeline for pooled or individual-based NGS data using bash and R☆21Updated 3 years ago
- loco-pipe is an automated Snakemake pipeline that streamlines a set of essential population genomic analyses for low-coverage whole genom…☆17Updated last month
- An R package for predicting ploidal level from sequence data using site-based heterozygosity☆16Updated 4 months ago
- ☆40Updated last year
- Graph-aware Retrieval of Selective Sweeps☆21Updated 9 months ago
- Population genetics analyses from NGS data☆25Updated 4 years ago
- Modification of BayesAss 3.0.4 to allow handling of large SNP datasets☆16Updated 3 years ago
- R functions for generating site frequency spectra (SFS) from a VCF file.☆27Updated 5 years ago
- Infer demographic history with the Moran model☆47Updated 2 weeks ago
- Sex assignment through coverage☆18Updated last month
- Materials for genome annotation sessions at the WORKSHOP ON GENOMICS, CESKY KRUMLOV☆16Updated 5 months ago