enormandeau / wgs_sample_preparationView external linksLinks
Trim, Align to genome, Deduplicate, Realign WGS sequencing samples
☆17Feb 4, 2026Updated last week
Alternatives and similar repositories for wgs_sample_preparation
Users that are interested in wgs_sample_preparation are comparing it to the libraries listed below
Sorting:
- ☆10Feb 25, 2024Updated last year
- Python Scripts for Bioinformatics☆15Apr 24, 2024Updated last year
- ☆31Jun 15, 2023Updated 2 years ago
- ☆12Feb 19, 2021Updated 4 years ago
- A Snakemake pipeline for Quality Control of Whole Genome Sequencing data☆14Jan 18, 2022Updated 4 years ago
- Visualization toolkit for differential splicing events☆17Nov 3, 2025Updated 3 months ago
- A nextflow pipeline for analysing expression and splicing in RNA seq data from rare disease patient☆18Nov 14, 2025Updated 3 months ago
- Scripts for Hill et al. (2022) doi:10.1093/molbev/msac085 🟣☆11Apr 28, 2023Updated 2 years ago
- This is something I have decided to do to make something good come out of the current covid situation. Here I will put the publicly avail…☆12Sep 6, 2021Updated 4 years ago
- STAR, cufflinks, cluster, DESeq2, GO analysis☆14Jun 27, 2020Updated 5 years ago
- Genome Annotation Without Nightmares☆46Feb 2, 2026Updated last week
- Genetic Map Comparison☆20Nov 10, 2022Updated 3 years ago
- ☆18Apr 18, 2024Updated last year
- bioinformatics learning☆13Oct 10, 2023Updated 2 years ago
- Repository☆10Oct 23, 2024Updated last year
- My R scripts, primarily R plotting scripts + some genomics software including 16S rRNA metataxnomics and RNAseq☆12Dec 19, 2022Updated 3 years ago
- ☆24Nov 9, 2017Updated 8 years ago
- ☆10Jan 30, 2020Updated 6 years ago
- Westlake BioBank for Chinese pilot project☆10May 17, 2023Updated 2 years ago
- Gene Prediction using MAKER, CEGMA, SNAP, GENEMARK & AUGUSTUS☆10Jul 20, 2017Updated 8 years ago
- An RNA-Seq data exploration tool that shows read map coverage of a gene of interest along with a coloured "electronic fluorescent pictog…☆13Jan 2, 2026Updated last month
- A collection of python and bash scripts for various bioinformatics-related tasks☆12Sep 19, 2024Updated last year
- ☆10Dec 2, 2025Updated 2 months ago
- loco-pipe is an automated Snakemake pipeline that streamlines a set of essential population genomic analyses for low-coverage whole genom…☆29Jan 21, 2026Updated 3 weeks ago
- Contributions to the #30daychartchallenge☆10Apr 10, 2025Updated 10 months ago
- Code used to process and analyze structural variants and short tandem repeat variants profiled in 719 deeply sequenced whole genomes as p…☆11Jun 25, 2019Updated 6 years ago
- PhenomeXcan: mapping the genome to the phenome through the transcriptome☆11Jun 28, 2020Updated 5 years ago
- Scripts for next generation sequencing analyses☆15Nov 6, 2025Updated 3 months ago
- An R package for plotting GWAS results from the GAPIT package☆14Oct 9, 2025Updated 4 months ago
- ☆12Jun 12, 2023Updated 2 years ago
- Standard operating procedures for H3ABionet data processing and analyses☆11Aug 30, 2021Updated 4 years ago
- ☆10Apr 13, 2022Updated 3 years ago
- ☆10May 17, 2022Updated 3 years ago
- This is the repository which contains the code that was used to generate the results and figures of the “Single-cell RNA-sequencing revea…☆12Jun 21, 2024Updated last year
- Heritability Estimation with high Efficiency using LD and Summary Statistics☆13Feb 14, 2024Updated 2 years ago
- Pipeline for eukaryotic genome annotation based on external evidences☆13Feb 23, 2023Updated 2 years ago
- ☆13Sep 7, 2022Updated 3 years ago
- Cool Bioinformatics Scripts☆12May 21, 2024Updated last year
- Direct RNA publication scripts☆11Sep 20, 2017Updated 8 years ago