An R script to generate plots for ADMIXTURE runs, for multiple K values.
☆19Feb 27, 2025Updated last year
Alternatives and similar repositories for AdmixturePlotter
Users that are interested in AdmixturePlotter are comparing it to the libraries listed below
Sorting:
- detectRuns: a R Package for Runs of Homozygosity and Runs of Heterozygosity☆12May 25, 2023Updated 2 years ago
- Main scripts and commands used to analyze goat population genetic and domestication☆19Mar 25, 2019Updated 6 years ago
- This is a tool to estimate pairwise relatedness from ancient DNA, taking in account contamination, ROH, ascertainment bias.☆14Aug 6, 2024Updated last year
- ☆12Oct 19, 2023Updated 2 years ago
- Scripts and notes on how to analyse ancient DNA genotype data to understand population structure☆43Jul 27, 2023Updated 2 years ago
- A python script to calculate the relative coverage of X and Y chromosomes, and their associated error bars, from the depth of coverage at…☆15May 2, 2023Updated 2 years ago
- ☆16Jun 14, 2019Updated 6 years ago
- Repository for the 2017 Genome Biology publication, "The interplay of demography and selection during maize domestication and expansion"☆17Nov 24, 2020Updated 5 years ago
- Scripts and resources for the haploblocks manuscript☆18Mar 20, 2020Updated 5 years ago
- Genomic Annotation in Livestock for positional candidate LOci☆13Feb 26, 2021Updated 5 years ago
- an R package for admixture analyses☆18May 15, 2015Updated 10 years ago
- Guide through code for a Minimmap2 genome alignment and a seq-seq-pan pan-genome alignment with visualizations in R. The tutorial present…☆19May 16, 2025Updated 9 months ago
- Methods and recipes for Plant Genome Annotation - Transposable Elements☆20Jun 10, 2025Updated 8 months ago
- An efficient tool for cross-population fixation index estimation on variant call format files☆11Jan 12, 2024Updated 2 years ago
- a C++ API of htslib to be easily integrated and safely used. More importantly, it can be callled seamlessly in R/Python/Julia etc.☆24Aug 6, 2025Updated 6 months ago
- This book summarises prepared mini-courses for various computational tools and methods in the field of human archaeogenetic data analysis…☆15Feb 5, 2026Updated 3 weeks ago
- Automated Rice Variant calling workflow for HPC, Cloud and Desktop systems.☆13May 11, 2024Updated last year
- Westlake BioBank for Chinese pilot project☆10May 17, 2023Updated 2 years ago
- genome annotation (RNAseq and TE) pipeline (draft)☆13Aug 26, 2025Updated 6 months ago
- ☆11Feb 16, 2021Updated 5 years ago
- Code used to process and analyze structural variants and short tandem repeat variants profiled in 719 deeply sequenced whole genomes as p…☆11Jun 25, 2019Updated 6 years ago
- ☆16Feb 11, 2022Updated 4 years ago
- Workflow for processing Illumina sequencing runs for ancient human DNA☆25Oct 29, 2020Updated 5 years ago
- Plotly BioVisualization 🎯 Interactive Needle and Manhattan Plots & Alignment Viewer☆11Feb 28, 2020Updated 6 years ago
- Building a Chinese pan-genome of 486 individuals☆12Nov 23, 2022Updated 3 years ago
- Coprolite host Identification pipeline☆12Feb 18, 2026Updated last week
- A small R notebook describing how plot common (aDNA) population genetics PCAs using R and the tidyverse.☆14May 3, 2019Updated 6 years ago
- Killifish genomics scripts☆12Feb 19, 2021Updated 5 years ago
- ☆13Mar 22, 2022Updated 3 years ago
- hot_scan is a free software to detect genomic regions unusually rich (hotspot) in a given pattern via scan statistics☆10Oct 17, 2013Updated 12 years ago
- A course with Jupyter Notebooks for Computational Population Genetics☆10Sep 4, 2022Updated 3 years ago
- ☆12Apr 10, 2021Updated 4 years ago
- ☆11Dec 15, 2025Updated 2 months ago
- PopLDdecay: a fast and effective tool for linkage disequilibrium decay analysis based on variant call format(VCF) files☆29Aug 15, 2024Updated last year
- Bash scripts and data used in pantranscriptomic paper☆24Oct 21, 2022Updated 3 years ago
- signatselect: Identifying signatures of selection☆12Dec 3, 2019Updated 6 years ago
- issues for semina "Data Visulization"☆13Dec 23, 2025Updated 2 months ago
- ☆13Jan 16, 2026Updated last month
- ☆15May 31, 2020Updated 5 years ago