mishaploid / Bo-demographyLinks
Demographic analysis of Brassica oleracea
☆10Updated last week
Alternatives and similar repositories for Bo-demography
Users that are interested in Bo-demography are comparing it to the libraries listed below
Sorting:
- R Package to Estimate Variable Recombination Rates using Population Genetic Data☆42Updated 5 years ago
- Tutorial on using popular tools for learning about population history☆51Updated 6 years ago
- Tools and Utilities for msmc and msmc2☆47Updated last year
- ☆24Updated 8 years ago
- ☆16Updated 3 years ago
- Pinpoints the mutation favored by selection☆34Updated 3 years ago
- Likelihood-based Selective Sweep Detection☆38Updated last year
- Scripts and notes on how to analyse ancient DNA genotype data to understand population structure☆34Updated last year
- ☆43Updated last year
- SelectionHapStats is a repository of Python scripts written to identify natural selection events in the genome and R scripts written to v…☆26Updated 6 years ago
- Infer demographic history with the Moran model☆47Updated 2 weeks ago
- scripts for the project of seven thaliana genomes assembly☆39Updated 4 years ago
- LDna: an R package to perform linkage disequilibrium network analysis☆31Updated last year
- Graph-aware Retrieval of Selective Sweeps☆21Updated 9 months ago
- Scripts and resources for the haploblocks manuscript☆16Updated 5 years ago
- Pipelines and tools for the processing of ancient and modern HTS data.☆47Updated 3 weeks ago
- R functions for generating site frequency spectra (SFS) from a VCF file.☆27Updated 5 years ago
- Population genetics analyses from NGS data☆25Updated 4 years ago
- Genealogical Estimation of Variant Age (GEVA)☆29Updated 3 years ago
- Pan-genome Construction and Population Structure Variation Calling pipeline☆41Updated 9 months ago
- SambaR: Snp datA Management and Basic Analyses in R☆28Updated last month
- predicting DFE and alpha from polymorphism data☆28Updated 6 years ago
- Scripts to analyze data using TreeMix. This pipeline runs TreeMix with bootstrapping, helps choose number of migration events and creates…☆35Updated last year
- Leroy & Rougemont - “learning-by-doing” introduction to population genomics - scripts☆20Updated 5 years ago
- A haplotype analysis toolkit for natural variation study.☆30Updated last year
- Bioinformatics pipeline to process whole genome resequencing data and perform genotype likelihood based population genomic analyses using…☆14Updated 3 weeks ago
- Estimate recombination rates from population genetic data☆67Updated 5 years ago
- loco-pipe is an automated Snakemake pipeline that streamlines a set of essential population genomic analyses for low-coverage whole genom…☆17Updated last month
- ☆19Updated 2 years ago
- Assessing confidence in introgression among four populations☆27Updated 4 years ago