ostnam / rust-wfaLinks
☆12Updated 3 years ago
Alternatives and similar repositories for rust-wfa
Users that are interested in rust-wfa are comparing it to the libraries listed below
Sorting:
- Low level bindings and wrapper for slow5lib, an alternative for ONT Nanopore sequencing FAST5 output☆10Updated last year
- Rust bindings to minimap2 library☆101Updated 3 weeks ago
- FASTA and FASTQ parsing in Rust☆80Updated 9 months ago
- bioinformatics toolkit in rust☆93Updated 2 months ago
- Command line utility for working with next-generation sequencing files.☆37Updated 5 months ago
- gia: Genomic Interval Arithmetic☆64Updated last year
- bedtools-like functionality for interval sets in rust☆55Updated 4 months ago
- A FASTA/FASTQ format parser library☆20Updated last year
- Iterate over minimizers of a DNA sequence☆31Updated last year
- ntHash implementation in Rust☆36Updated last year
- an API for intersections of genomic data☆132Updated 2 weeks ago
- A bit-packed k-mer representation (and relevant utilities) for rust☆47Updated last year
- Alignment-based gene expression quantification☆30Updated 3 months ago
- Rust implmentation of VCF parser☆25Updated 3 years ago
- Bioinformatics 101 tool for counting unique k-length substrings in DNA☆33Updated 2 years ago
- Pairwise nucleotide alignment benchmark of Rust bindings☆30Updated 2 years ago
- A high-performance BigWig and BigBed library in Rust☆108Updated last month
- Optimal sequence-to-graph alignment with recombinations☆38Updated 4 months ago
- Fast and exact gap-affine partial order alignment☆57Updated last month
- Benchmarking pairwise aligners☆36Updated 10 months ago
- Creating alignment plots from bam files☆69Updated 3 weeks ago
- Rust UMI Directional Adjacency Deduplicator☆15Updated 6 years ago
- Fast approximate string searching☆86Updated 2 weeks ago
- ☆50Updated 3 years ago
- expressions on VCFs☆87Updated 7 months ago
- ☆15Updated 2 years ago
- Generate random test data for bioinformatics☆26Updated last year
- implicit pangenome graph☆84Updated last week
- ☆26Updated last month
- A quality control tool for FASTQ files written in rust☆52Updated 6 months ago