☆42Feb 12, 2026Updated 2 months ago
Alternatives and similar repositories for anndata-rs
Users that are interested in anndata-rs are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Single Rust: Pioneering single-cell analysis with Rust's concurrency for scalable, high-throughput pipelines. 🧬🚀☆97Nov 24, 2025Updated 4 months ago
- Single-cell analysis methods in Rust☆33Nov 4, 2025Updated 5 months ago
- The AnnSQL package enables SQL based queries on AnnData objects.☆41Aug 20, 2025Updated 7 months ago
- single-cell latent diffusion model☆46Updated this week
- ☆12Jul 4, 2022Updated 3 years ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- ☆19Mar 19, 2026Updated 3 weeks ago
- Build contrasts for models defined with formulaic☆12Updated this week
- Nearest neighbor search algorithms including a ball tree and a vantage point tree.☆12Dec 2, 2025Updated 4 months ago
- A performant scientific image visualization system.☆36Mar 20, 2026Updated 3 weeks ago
- Container class to represent genomic locations and support genomic analysis☆26Updated this week
- Cookiecutter profile for making a NextFlow-based bioinformatics tool☆17Jul 8, 2024Updated last year
- shrimPy: Smart High-throughput Robust Imaging & Measurement in Python☆13Mar 29, 2026Updated 2 weeks ago
- Adata Viewer: Head/Less/Shape h5ad file in terminal☆12Mar 19, 2025Updated last year
- ☆15Nov 30, 2023Updated 2 years ago
- NordVPN Threat Protection Pro™ • AdTake your cybersecurity to the next level. Block phishing, malware, trackers, and ads. Lightweight app that works with all browsers.
- Hardware go brrr bounded context suffix array construction algorithm☆19Nov 1, 2023Updated 2 years ago
- Slides and Notebooks for scverse 2024☆17Sep 24, 2024Updated last year
- A Python toolkit for subcellular analysis of spatial transcriptomics data☆88Nov 16, 2025Updated 4 months ago
- Collection of KNN algorithms in C++☆20Feb 26, 2026Updated last month
- An introduction to OME-Zarr for big bioimaging data☆24Mar 30, 2026Updated last week
- your friendly pangenome graph genotyper☆10Feb 6, 2023Updated 3 years ago
- Tools for working FASTQ files from sequencers (R1/R2/I1/I2)☆12Dec 6, 2024Updated last year
- Universal Single-Cell Genomics Preprocessing package☆49Feb 21, 2026Updated last month
- ☆12Jan 31, 2023Updated 3 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click and start building anything your business needs.
- pandasGWAS: a Python package for easy retrieval of GWAS Catalog data☆17Dec 19, 2025Updated 3 months ago
- bedtools-like functionality for interval sets in rust☆55Aug 5, 2025Updated 8 months ago
- ☆19Mar 21, 2024Updated 2 years ago
- ITK IO for images stored in OME-Zarr format.☆11Sep 4, 2025Updated 7 months ago
- Shadow objects for AnnData and MuData (experimental)☆12Feb 28, 2025Updated last year
- ☆21Updated this week
- A high-performance BigWig and BigBed library in Rust☆113Feb 13, 2026Updated last month
- Single-cell epigenomics analysis tools☆312Mar 13, 2026Updated 3 weeks ago
- A Rust-based library for phylogenetic analysis and manipulation☆17Feb 10, 2026Updated 2 months ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click and start building anything your business needs.
- Analyse gigapixel images, annotated with millions of geometries, using a modern, highly-performant web interface.☆18Jan 4, 2026Updated 3 months ago
- Quickly find the affine matrix mapping one image to another using manual correspondence points annotation☆22Aug 6, 2025Updated 8 months ago
- Repository for modeling PRO-cap data with the BPNet-like model, ProCapNet.☆20Aug 28, 2025Updated 7 months ago
- Gene regulatory network inference for RNA velocity and pseudotime data☆29Nov 6, 2025Updated 5 months ago
- A flexible and fast sgRNA counter from FASTQ Files☆11Dec 29, 2025Updated 3 months ago
- Annotated multivariate observation data in R☆53Apr 1, 2026Updated last week
- Given a set of kmers (fasta format) and a set of sequences (fasta format), this tool will extract the sequences containing the kmers.☆21Oct 20, 2023Updated 2 years ago