An aDNA aware short-read mapper
☆22Apr 22, 2026Updated 2 months ago
Alternatives and similar repositories for mapAD
Users that are interested in mapAD are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- A pipeline for the analysis of sedimentary ancient mtDNA.☆17Jun 18, 2026Updated last month
- Software to call ROHs☆20Apr 9, 2026Updated 3 months ago
- This is a tool to estimate pairwise relatedness from ancient DNA, taking in account contamination, ROH, ascertainment bias.☆17Aug 6, 2024Updated last year
- This book summarises prepared mini-courses for various computational tools and methods in the field of human archaeogenetic data analysis…☆17Updated this week
- Rust implementation of the wavefront alignment algorithm☆14Jul 4, 2022Updated 4 years ago
- End-to-end encrypted cloud storage - Proton Drive • AdSpecial offer: 40% Off Yearly / 80% Off First Month. Protect your most important files, photos, and documents from prying eyes.
- ONEcode package to replace SAM/BAM, especially for eDNA mapping to everything☆18Jun 27, 2026Updated 3 weeks ago
- Optimal sequence-to-graph alignment with recombinations☆41Apr 28, 2026Updated 2 months ago
- Pipeline to generate variant catalogues, a list of variants and their frequencies in a population, from whole genome sequences.☆13Jun 3, 2025Updated last year
- Processing WGS aDNA data using the ReichLab protocol☆13Mar 8, 2019Updated 7 years ago
- A python script to calculate the relative coverage of X and Y chromosomes, and their associated error bars, from the depth of coverage at…☆16May 2, 2023Updated 3 years ago
- ☆13Oct 19, 2023Updated 2 years ago
- Quickly find and score consensus between metabolite identifications and gene annotations☆18Nov 10, 2025Updated 8 months ago
- Coprolite host Identification pipeline☆13Apr 30, 2026Updated 2 months ago
- A workflow for integrating ancient lineages into present-day phylogenies.☆32Jul 7, 2025Updated last year
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- ☆19Sep 20, 2021Updated 4 years ago
- The Poseidon Community Archive (PCA). Download from here: https://server.poseidon-adna.org/explorer/community-archive NOT through the G…☆17Updated this week
- MONI: A Pangenomic Index for Finding MEMs☆37Mar 25, 2025Updated last year
- taxonomic classifier based on the kraken2 algorithms and more☆46Dec 12, 2025Updated 7 months ago
- A python implementation of "Risk of non Adaptedness" method (with a bit of R too!)☆10Aug 2, 2021Updated 4 years ago
- Consensus assembly and variant calling workflow.☆12May 26, 2015Updated 11 years ago
- An R script to generate plots for ADMIXTURE runs, for multiple K values.☆19Feb 27, 2025Updated last year
- Wavelet Matrix implementation written in Rust☆17Sep 13, 2022Updated 3 years ago
- pangenome from maximal blocks in an MSA☆11Sep 17, 2024Updated last year
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.