Alternatives and similar repositories for sfasta:

Users that are interested in sfasta are comparing it to the libraries listed below

• brianli314 / palindrome-finder
  A bioinformatics tool written in Rust to find palindromic sequences in DNA
  ☆34Updated 2 months ago
• telatin / covtobed
  ⛰ covtobed | Convert the coverage track from a BAM file into a BED file
  ☆44Updated 3 years ago
• varfish-org / mehari
  VEP-like tool for sequence ontology and HGVS annotation of VCF files
  ☆19Updated this week
• TravisWheelerLab / nail
  Nail is an Alignment Inference tooL
  ☆45Updated last week
• natir / biotest
  Generate random test data for bioinformatics
  ☆26Updated 10 months ago
• noamteyssier / gia
  gia: Genomic Interval Arithmetic
  ☆62Updated 8 months ago
• EvolBioInf / fur
  Find Unique genomic Regions
  ☆29Updated 3 weeks ago
• epi2me-labs / kraken2-server
  Kraken2 Server
  ☆21Updated last year
• alignoth / alignoth
  Creating alignment plots from bam files
  ☆56Updated last week
• sanger-tol / genomeassembly
  Implementation of ToL genome assembly workflows
  ☆20Updated this week
• SouthGreenPlatform / panache
  Panache is a web-based interface designed for the visualization of linearized pangenomes. It can be used to show presence/absence informa…
  ☆44Updated last year
• fulcrumgenomics / fqtk
  Fast FASTQ sample demultiplexing in Rust.
  ☆62Updated last week
• rpetit3 / fastq-scan
  Output FASTQ summary statistics in JSON format
  ☆29Updated 2 years ago
• rcedgar / urmap
  URMAP ultra-fast read mapper
  ☆38Updated 4 years ago
• broadinstitute / poasta
  Fast and exact gap-affine partial order alignment
  ☆49Updated last week
• IARCbioinfo / alignment-nf
  Whole Exome/Whole Genome Sequencing alignment pipeline
  ☆28Updated 7 months ago
• brentp / vcfexpress
  expressions on VCFs
  ☆83Updated this week
• shenwei356 / unikmer
  A versatile toolkit for k-mers with taxonomic information
  ☆77Updated 8 months ago
• Psy-Fer / blue-crab
  crab go snap snap
  ☆38Updated 2 months ago
• cpockrandt / PhyloCSFpp
  PhyloCSF++ computes PhyloCSF tracks for whole-genome multiple sequence alignments, scores single MSA, annotates CDS features in GFF/GTF f…
  ☆31Updated 3 years ago
• pierrepeterlongo / back_to_sequences
  ☆41Updated last month
• eclarke / komplexity
  A method of assessing sequence complexity based on kmer frequencies
  ☆32Updated 7 years ago
• mbhall88 / nohuman
  Remove human reads from a sequencing run
  ☆40Updated 6 months ago
• mrvollger / rustybam
  bioinformatics toolkit in rust
  ☆87Updated last week
• vembrane / vembrane
  vembrane filters VCF records using python expressions
  ☆58Updated last month
• alejandrogzi / gtfsort
  a lexicographically-based GTF/GFF sorter
  ☆33Updated 8 months ago
• PacificBiosciences / SVTopo
  Complex structural variant visualization for HiFi sequencing data
  ☆26Updated this week
• jenniferlu717 / SkewIT
  GC Skew Test for Bacterial Genomes
  ☆27Updated 2 years ago
• davidemms / SHOOT
  SHOOT.bio - the phylogenetic search engine
  ☆24Updated last year
• kamimrcht / REINDEER
  REINDEER REad Index for abuNDancE quERy
  ☆57Updated 8 months ago