jguhlin / sfastaLinks
sfasta
☆35Updated 3 months ago
Alternatives and similar repositories for sfasta
Users that are interested in sfasta are comparing it to the libraries listed below
Sorting:
- Generate random test data for bioinformatics☆26Updated last year
- gia: Genomic Interval Arithmetic☆65Updated last year
- A bioinformatics tool written in Rust to find palindromic sequences in DNA☆35Updated 6 months ago
- A FASTA/FASTQ format parser library☆20Updated last year
- Find Unique genomic Regions☆30Updated 3 weeks ago
- ⛰ covtobed | Convert the coverage track from a BAM file into a BED file☆45Updated 2 months ago
- Panache is a web-based interface designed for the visualization of linearized pangenomes. It can be used to show presence/absence informa…☆45Updated 2 years ago
- Read contamination removal☆25Updated last year
- A quality control tool for FASTQ files written in rust☆52Updated 2 months ago
- Filter of Pairwise Alignement☆45Updated 3 years ago
- Malleable All-seeing Journal Of Research Artifacts☆36Updated 2 years ago
- Fast sequencing data quality metrics☆27Updated 2 months ago
- A Go implementation of the strobemers (https://github.com/ksahlin/strobemers)☆15Updated 4 years ago
- A simple tool to fix PacBio fasta/q that was not properly split into subreads☆15Updated 4 years ago
- Fast and exact gap-affine partial order alignment☆54Updated last month
- Remove human reads from a sequencing run☆40Updated 3 weeks ago
- A (very) fast program for getting statistics about a fastq file, the way I need them, written in Rust☆32Updated 7 months ago
- Creating alignment plots from bam files☆65Updated this week
- A long read simulator based on badread idea☆23Updated 2 years ago
- REINDEER REad Index for abuNDancE quERy☆57Updated last month
- ☆44Updated last month
- Assembler for raw de novo genome assembly of long uncorrected reads.☆37Updated 5 years ago
- overlapping bases in read-pairs from a fragment indicate accuracy and reveal error-prone sites☆33Updated 2 months ago
- Python3 module for running MUMmer and reading the output☆33Updated 5 months ago
- Kraken2 Server☆22Updated last year
- map Illumina metagenomes to genomes!☆39Updated this week
- Nail is an Alignment Inference tooL☆51Updated last week
- A Nextflow pipeline for genome and pan-genome annotation☆15Updated 2 months ago
- Classify sequencing reads using MinHash.☆48Updated 5 years ago
- Output FASTQ summary statistics in JSON format☆30Updated 2 years ago