chenqumi / LepMAP3Links
scripts for a Genetics Map software
☆11Updated 7 years ago
Alternatives and similar repositories for LepMAP3
Users that are interested in LepMAP3 are comparing it to the libraries listed below
Sorting:
- Bulked-Segregant Analysis using vcf file with or without parents☆31Updated last year
- Scripts that used in our chicken T2T manuscript.☆22Updated 2 years ago
- A tool for performing collinearity-incorporating homology inference☆33Updated 2 years ago
- The code used in the manuscript titled "Gene duplication and evolution in recurring polyploidization-diploidization cycles in plants".☆29Updated 4 years ago
- This is a method to find telomeres and centromeres in plants.☆42Updated 2 years ago
- scripts for the project of seven thaliana genomes assembly☆42Updated 4 years ago
- ☆42Updated 5 months ago
- This is a workflow that combines multiple software, mainly for whole genome annotation of eukaryotes.☆29Updated last year
- Pan-genome Construction and Population Structure Variation Calling pipeline☆45Updated last year
- Plant genome assembly and annotation pipeline using snakemake☆51Updated 7 months ago
- Code for Article "A pan-genome of 69 Arabidopsis thaliana accessions reveals a conserved genome structure throughout the global species r…☆23Updated last year
- Chromosome-scale and haplotype-resolved assmebly of tetraploid cultiavetd potato with polyploidy graph binning☆28Updated last year
- The tools are used for displaying hic signal of genome☆24Updated 4 years ago
- A machine learning-based genotyping tool for structural variation in short reads☆25Updated 3 months ago
- Dynamic Elongation of a Genome Assembly Path☆23Updated 2 weeks ago
- ☆32Updated 11 months ago
- ☆29Updated 2 years ago
- ☆26Updated 2 years ago
- ☆21Updated last year
- A pipeline for genomic variant detection with genome assemblies at population scale☆34Updated 6 months ago
- Analyses of sex chromosome evolution in songbirds☆16Updated 6 years ago
- The repository for codes developed to generated the Maize NC358 assemblies and analyses.☆10Updated 5 years ago
- ☆26Updated 3 years ago
- Resistify is a program which rapidly identifies and classifies plant resistance genes from protein sequences. It is designed to be lightw…☆40Updated last week
- Easily construct the ML species tree with single-copy gene shared by different species.☆27Updated 7 years ago
- Python script calculating transposable element density for all genes in a genome. Publication: https://mobilednajournal.biomedcentral.com…☆35Updated last year
- Centromics: visualing centromeres with multiple omics data☆25Updated 9 months ago
- “When everything is connected to everything else, for better or worse, everything matters.” Bruce Mau☆19Updated 5 years ago
- ☆14Updated 7 months ago
- ☆41Updated 2 years ago