informationsea / vcf-rsLinks
Rust implmentation of VCF parser
☆23Updated 2 years ago
Alternatives and similar repositories for vcf-rs
Users that are interested in vcf-rs are comparing it to the libraries listed below
Sorting:
- Alignment-based gene expression quantification☆29Updated 3 months ago
- ☆51Updated 2 years ago
- A bit-packed k-mer representation (and relevant utilities) for rust☆48Updated last year
- Rust bindings to minimap2 library☆101Updated 2 weeks ago
- FASTA and FASTQ parsing in Rust☆79Updated 4 months ago
- bgzip support for Rust☆16Updated last year
- Fast and flexible tool for reading, modifying and writing biological sequences☆18Updated last week
- Efficient querying of biological databases☆39Updated 3 weeks ago
- ☆58Updated 2 years ago
- BAM CIGAR / MD transcoder for compact on-memory representation and quick drawing☆20Updated last year
- A library of common biomedical types.☆37Updated 3 months ago
- A genomic minhashing implementation in Rust☆99Updated 3 weeks ago
- ☆11Updated 3 years ago
- De Bruijn graphs in Rust☆71Updated 11 months ago
- Rust utility code☆33Updated last year
- Fasten toolkit, for streaming operations on fastq files☆79Updated 3 months ago
- Pairwise nucleotide alignment benchmark of Rust bindings☆31Updated last year
- An ultrafast and memory efficient tool for phylogenomics☆26Updated this week
- Low level bindings and wrapper for slow5lib, an alternative for ONT Nanopore sequencing FAST5 output☆10Updated 8 months ago
- Convert vcf in parquet☆27Updated 5 months ago
- bioinformatics toolkit in rust☆90Updated last month
- Single-Cell RNA-seq pseudo-aligner☆51Updated last year
- A Rust library for parsing, writing and manipulating Genbank sequence files☆20Updated 2 months ago
- Bioinformatics Algorithms implemented in Rust for Learners☆32Updated 3 years ago
- A high-performance BigWig and BigBed library in Rust☆98Updated last month
- Iterate over minimizers of a DNA sequence☆31Updated last year
- an API for intersections of genomic data☆75Updated 3 weeks ago
- gia: Genomic Interval Arithmetic☆65Updated 10 months ago
- The D4 Quantitative Data Format☆166Updated 2 months ago
- ntHash implementation in Rust☆36Updated last year