informationsea / vcf-rs
Rust implmentation of VCF parser
☆23Updated 2 years ago
Alternatives and similar repositories for vcf-rs:
Users that are interested in vcf-rs are comparing it to the libraries listed below
- Alignment-based gene expression quantification☆27Updated last month
- A bit-packed k-mer representation (and relevant utilities) for rust☆48Updated 10 months ago
- Rust utility code☆32Updated last year
- Rust bindings to minimap2 library☆95Updated last week
- Fast and flexible tool for reading, modifying and writing biological sequences☆17Updated this week
- bgzip support for Rust☆16Updated last year
- ☆11Updated 2 years ago
- ☆58Updated 2 years ago
- bioinformatics toolkit in rust☆88Updated 2 weeks ago
- FASTA and FASTQ parsing in Rust☆77Updated last month
- ☆51Updated 2 years ago
- Pairwise nucleotide alignment benchmark of Rust bindings☆31Updated last year
- De Bruijn graphs in Rust☆67Updated 9 months ago
- A (very) fast program for getting statistics about a fastq file, the way I need them, written in Rust☆30Updated 3 months ago
- Efficient querying of biological databases☆36Updated last week
- An ultrafast and memory efficient tool for phylogenomics☆25Updated last month
- Rust UMI Directional Adjacency Deduplicator☆15Updated 5 years ago
- Fasten toolkit, for streaming operations on fastq files☆79Updated last month
- Toolkit for manipulating FASTA and SAM files☆18Updated last year
- ☆46Updated 2 years ago
- gia: Genomic Interval Arithmetic☆62Updated 8 months ago
- BAM CIGAR / MD transcoder for compact on-memory representation and quick drawing☆20Updated last year
- A library of common biomedical types.☆37Updated 3 weeks ago
- ntHash implementation in Rust☆36Updated 9 months ago
- an API for intersections of genomic data☆75Updated this week
- ☆27Updated last year
- Bioinformatics Algorithms implemented in Rust for Learners☆31Updated 3 years ago
- Convert vcf in parquet☆26Updated 3 months ago
- Per-base per-nucleotide depth analysis☆127Updated 3 months ago
- Bit-packed and well-typed biological sequences☆33Updated last week