nf-core / tower-actionLinks
GitHub Action to launch a workflow using Nextflow Tower.
☆12Updated 2 years ago
Alternatives and similar repositories for tower-action
Users that are interested in tower-action are comparing it to the libraries listed below
Sorting:
- Nextflow workflow syntax highlighting and snippets for Sublime Text 4☆24Updated 11 months ago
- Differential gene expression analysis and pathway analysis of RNAseq data☆32Updated 5 months ago
- Customer workshop materials☆18Updated 2 years ago
- Nextflow workflow for automatic repeat detection, classification and masking☆13Updated 7 years ago
- ⛰ covtobed | Convert the coverage track from a BAM file into a BED file☆44Updated last month
- ☆29Updated 6 years ago
- A collection of unexpected challenges and learnings with nextflow and nf-core.☆41Updated 2 years ago
- R Interface to the NCBI SRA metadata☆23Updated 7 years ago
- Nextflow Tower CLI tool☆50Updated last week
- Making Snakemake workflows into full-fledged command line tools since 1999.☆51Updated 7 years ago
- Please consider using/contributing to https://github.com/nf-core/sarek☆41Updated 4 years ago
- Short idioms and patterns for transforming, merging and managing files and channels in Nextflow.☆17Updated 4 months ago
- Samwell: a python package for using genomic files... well☆20Updated 3 years ago
- simple bioinformatics command-line (t)ools (i) (w)ished (i) (h)ad.☆44Updated 2 years ago
- Nextflow workshop 2018 -- Training pages -> https://nextflow-io.github.io/nf-hack18/☆19Updated 6 years ago
- Fast sequencing data quality metrics☆31Updated 3 months ago
- Mapped QC analysis program☆44Updated 7 years ago
- Params validation plugin for Nextflow pipelines☆48Updated last year
- Pipeline to produce consensus reads using unique molecular indexes/barcodes (UMIs)☆26Updated last week
- Manuscript describing ChronQC is now available online in Bioinformatics☆18Updated 6 years ago
- Splice junction analysis and filtering from BAM files☆42Updated 3 years ago
- A collection of modules and sub-workflows for Nextflow☆28Updated last month
- Luslab nextflow modules☆14Updated 4 years ago
- A command line tool to compute mapping statistics from a BAM file☆25Updated 3 years ago
- Multi-sample genome coverage viewer to observe large, coverage-based anomalies alongside annotations and sample metadata☆58Updated 3 years ago
- ☆24Updated 6 months ago
- UMCU Genetics Nextflow modules☆28Updated last year
- Whole Exome/Whole Genome Sequencing alignment pipeline☆28Updated last year
- Intersect multiple VCF files with haplotype awareness☆25Updated 4 years ago
- Flexible and efficient parsing, interpreting and editing of sequencing reads☆44Updated this week