luslab / luslab-nf-modules
Luslab nextflow modules
☆14Updated 3 years ago
Alternatives and similar repositories for luslab-nf-modules:
Users that are interested in luslab-nf-modules are comparing it to the libraries listed below
- GitHub Action to launch a workflow using Nextflow Tower.☆12Updated last year
- Docker containers for bioinformatics with a small footprint☆23Updated last year
- k-mer similarity analysis pipeline☆20Updated last month
- reference free variant assembly☆33Updated last year
- ☆11Updated 4 years ago
- Customer workshop materials☆17Updated last year
- Analyze a set of genomes with the anvi'o pangenome pipeline☆17Updated last year
- SeqWho - A reliable and rapid FASTQ(A) file classifier☆11Updated 3 years ago
- Automatically source dotenv files into your Nextflow scope☆9Updated last month
- Simulate mutations in genomes☆15Updated 4 years ago
- A message queue for genomic surveillance☆20Updated 3 years ago
- A fast, easy way to present complex bioinformatics pipelines to biologists☆11Updated 6 years ago
- BACTpipe: An assembly and annotation pipeline for bacterial genomics☆20Updated 3 months ago
- Output FASTQ summary statistics in JSON format☆29Updated 2 years ago
- a Rust crate for working with a local copy of the NCBI Taxonomy database☆10Updated 2 years ago
- Nextflow workshop 2018 -- Training pages -> https://nextflow-io.github.io/nf-hack18/☆18Updated 5 years ago
- Artisanal 🤣 bioinformatics tools and pipelines in Scala☆20Updated 5 years ago
- UMCU Genetics Nextflow modules☆28Updated 4 months ago
- Read contamination removal☆24Updated last year
- Maximum Likelihood Amplicon Pipeline☆22Updated 9 months ago
- Nanopore Real-Time Analysis Tool☆15Updated 6 months ago
- Explore and analyze biological sequence data☆16Updated 7 months ago
- A Go implementation of the strobemers (https://github.com/ksahlin/strobemers)☆14Updated 3 years ago
- Splitting and accelerating the Oxford Nanopore basecaller guppy using CPU with the SLURM job scheduler☆15Updated 8 months ago
- A (very) fast program for getting statistics about a fastq file, the way I need them, written in Rust☆30Updated last month
- Highly sensitive pathogen detection☆12Updated 4 years ago
- Converts 'MultiQC' Reports into Tidy Data Frames☆18Updated 11 months ago
- ☆19Updated 8 years ago
- Homebrew formulae for bioinformatics software only available for Linux☆27Updated 5 years ago
- Preprocessing paired-end reads produced with experiment-specific protocols☆32Updated 6 years ago