ypriverol / containers-rules-manuscript
Recommendations to contenarized your bioinformatics software
☆11Updated 6 years ago
Alternatives and similar repositories for containers-rules-manuscript:
Users that are interested in containers-rules-manuscript are comparing it to the libraries listed below
- ☆11Updated 7 years ago
- Homebrew formulae for bioinformatics software only available for Linux☆27Updated 5 years ago
- Talk to the NCBI EUtils☆21Updated 4 years ago
- What's The Function of these genes?☆22Updated 7 years ago
- Biological Graphic tool in Python☆34Updated 4 years ago
- Viral Identification and Discovery - A viral characterization pipeline built in Nextflow.☆11Updated 4 years ago
- Precursor to SnakeChunks, see https://github.com/SnakeChunks/SnakeChunks. This project has moved and will no longer be edited here.☆11Updated 7 years ago
- ☆41Updated 6 years ago
- Making Snakemake workflows into full-fledged command line tools since 1999.☆51Updated 6 years ago
- ☆43Updated 8 years ago
- Tutorial for working with cloud infrastructure and AWS from R☆20Updated 7 years ago
- Qtip: a tandem simulation approach for accurately predicting read alignment mapping qualities☆25Updated 5 years ago
- GitHub Action to launch a workflow using Nextflow Tower.☆12Updated last year
- A nextflow implementation of Kallisto & Sleuth RNA-Seq Tools☆22Updated 6 years ago
- R Interface to the NCBI SRA metadata☆23Updated 6 years ago
- A collection of modules and sub-workflows for Nextflow☆26Updated this week
- BigWig manpulation tools using libBigWig and htslib☆28Updated 5 months ago
- Nextflow workflow for automatic repeat detection, classification and masking☆13Updated 6 years ago
- Convert, explore, and manipulate GFF and GTF files (used in bioinformatics) using a sqlite-based approach☆35Updated 14 years ago
- Tools for next-generation sequencing analysis☆88Updated 5 years ago
- Validate FastQ Files☆36Updated 6 years ago
- Nextflow workshop 2018 -- Training pages -> https://nextflow-io.github.io/nf-hack18/☆18Updated 5 years ago
- IPAW: a Nextflow workflow for proteogenomics☆25Updated 5 months ago
- Library of snakemake rules.☆12Updated 6 years ago
- Scalable RNA-seq analysis☆73Updated 4 years ago
- Response to blog post about Salmon☆37Updated 7 years ago
- Prepare Sailfish and Salmon output for downstream analysis☆43Updated 5 years ago
- gatk4 RNA variant calling pipeline☆40Updated this week
- A Practical (And Opinionated) Guide To Analyzing 450K Data☆35Updated 10 years ago
- Course homepages for some of the courses given at SciLifeLab☆21Updated 4 years ago