Xiangyang1984 / GclusterLinks
A simple-to-use tool for visualizing and comparing genome contexts for numerous genomes
☆17Updated last year
Alternatives and similar repositories for Gcluster
Users that are interested in Gcluster are comparing it to the libraries listed below
Sorting:
- Plot genome alignment figure using progressiveMauve & genoPlotR☆22Updated 3 years ago
- Rapid and simple taxonomic profiling of genome and metagenome contigs☆28Updated 2 years ago
- 🍊 💫 Trim, circularise and orient long read bacterial genome assemblies☆26Updated 5 years ago
- Prokaryotic Pangenome Analysis☆24Updated 3 years ago
- ☆14Updated 4 years ago
- Microbial Genome Circular plotting tool for comparative genomics using Circos☆38Updated 2 years ago
- Genome-wide gene gain/loss mapping tool using DTL(Duplication-Transfer-Loss) reconciliation method☆16Updated 2 years ago
- transposable element typing pipeline☆18Updated last year
- Genome size estimation from long read overlaps☆59Updated 2 weeks ago
- A Python implementation of the OrthoANI algorithm for nucleotide identity measurement.☆31Updated 2 weeks ago
- convert a blast output to a bed file☆12Updated 10 years ago
- Correcting errors in noisy long reads using variation graphs☆51Updated 2 years ago
- Parallel/Homoplasic SNP Finder☆21Updated 2 years ago
- Cython bindings and Python interface to FastANI, a method for fast whole-genome similarity estimation.☆23Updated 2 weeks ago
- a broadly applicable tool for automated gene identification and retrieval☆32Updated 8 months ago
- ⚡️🧬 FastMLST: A multi-core tool for multilocus sequence typing of draft genome assemblies☆27Updated 5 months ago
- SHOOT.bio - the phylogenetic search engine☆25Updated 2 years ago
- Finding regions of similarity between plasmids☆16Updated 2 years ago
- A script for comparing old vs new versions of genome annotations☆21Updated 2 years ago
- Phylogeny Enhanded Prediction of PAN-genome☆41Updated 5 years ago
- Microbial agile accurate SNP Typer☆30Updated last year
- A pipeline for whole genome assembly☆16Updated 3 years ago
- Automated strain separation of low-complexity metagenomes☆51Updated 3 years ago
- MetaSNV, a metagenomic SNV calling pipeline.☆20Updated 3 years ago
- BinaRena: Interactive Visualization and Binning of Metagenomic Contigs☆32Updated 11 months ago
- Remove contaminated contigs from genomes using k-mers and taxonomies.☆59Updated last year
- RCandy: an R package for visualising homologous recombination events in bacterial genomes☆24Updated 3 years ago
- ZGA prokaryotic genome assembly and annotation pipeline☆12Updated 10 months ago
- Variant call verification☆16Updated 2 months ago
- Core ELEment Bias Removal In Metagenome Binned ORthologs: A pipeline to make pangenomes from MAGs☆24Updated last year