nf-core / methylseqLinks
Methylation (Bisulfite-Sequencing) analysis pipeline using Bismark or bwa-meth + MethylDackel
☆170Updated 2 weeks ago
Alternatives and similar repositories for methylseq
Users that are interested in methylseq are comparing it to the libraries listed below
Sorting:
- A package for including transposable elements in differential enrichment analysis of sequencing datasets.☆258Updated 6 months ago
- Tool for the Quality Control of Long-Read Defined Transcriptomes☆236Updated 3 weeks ago
- Discovering known and novel miRNAs from small RNA sequencing data☆153Updated last year
- Estimating tumor fraction in cell-free DNA from ultra-low-pass whole genome sequencing.☆186Updated last year
- ATAC-seq peak-calling and QC analysis pipeline☆208Updated last month
- SUPPA: Fast quantification of splicing and differential splicing☆279Updated last year
- This Snakemake pipeline implements the GATK best-practices workflow☆257Updated 2 years ago
- Iso-Seq - Scalable De Novo Isoform Discovery from Single-Molecule PacBio Reads☆219Updated last month
- Fast and accurate gene fusion detection from RNA-Seq data☆245Updated this week
- A short tutorial on how to use RSEM☆138Updated 5 years ago
- ☆154Updated 2 years ago
- parallel fastq-dump wrapper☆299Updated 2 years ago
- ASCAT R package☆186Updated 5 months ago
- A structural variation pipeline for short-read sequencing☆192Updated this week
- GATK RNA-Seq Variant Calling in Nextflow