PreMedKB / PAnnoLinks
PAnno is a Pharmacogenomics Annotation tool for clinical genomic testing.
☆15Updated 2 years ago
Alternatives and similar repositories for PAnno
Users that are interested in PAnno are comparing it to the libraries listed below
Sorting:
- Callable Cancer Loci - assessment of sequencing coverage for actionable and pathogenic loci in cancer☆21Updated 4 years ago
- Bedfile perturbation tool☆17Updated last year
- A set of tools to annotate VCF files with expression and readcount data☆29Updated 6 months ago
- Ximmer is a system for CNV calling on exome and targeted genomic sequencing☆19Updated last week
- iAnnotateSV is a Python library and command-line software toolkit to annotate and visualize structural variants detected from Next Genera…☆16Updated 2 weeks ago
- Allele frequency filter app☆14Updated 3 years ago
- Clinical Variant Annotation Pipeline☆10Updated 5 years ago
- v2.x of the microassembly based somatic variant caller☆23Updated 2 months ago
- extract SV signal from a BAM☆11Updated 7 years ago
- CADD-SV – a framework to score the effect of structural variants☆15Updated 6 months ago
- Allele frequency filtering for Mendelian variant discovery☆18Updated 8 years ago
- Unfazed by genomic variant phasing☆27Updated last year
- dv-trio provides a pipeline to call variants for a trio (father-mother-child) using DeepVariants [1]. Genomic Variant Calling Files (gVCF…☆11Updated 4 years ago
- Building the constrained coding regions (CCR) model☆16Updated 6 years ago
- Structural Variation breakpoint discovery via adaptive learning☆16Updated 2 years ago
- a Shiny/R application to view and annotate copy number variations☆28Updated 2 years ago
- A high-performance search engine for large-scale genomic interval datasets☆19Updated 4 years ago
- Algorithm to implement Fraction and Allelic Copy number Estimate from Tumor/normal Sequencing using unmatched normal sample(s) for log ra…☆12Updated 2 years ago
- Targeted and non-targeted anticancer drugs and drug regimens☆29Updated this week
- A webtool for the clinical interpretation of CNVs in rare disease patients☆12Updated 3 years ago
- Allele-Specific Quantification of Structural Variations in Cancer Genomes☆18Updated 6 years ago
- DRAGEN Tumor/Normal workflow post-processing☆22Updated 2 years ago
- Structural variant pipeline☆17Updated 5 years ago
- Reducing reference bias using multiple population reference genomes☆33Updated last year
- Filter and prioritize fusion calls☆20Updated 11 months ago
- R Interface to the NCBI SRA metadata☆23Updated 6 years ago
- Population-based detection of structural variation from High-Throughput Sequencing.☆32Updated 3 years ago
- CLI to automate Nextflow pipeline testing☆12Updated last week
- ☆23Updated this week
- RCK: Reconstruction of clone- and haplotype-specific Cancer Karyotypes☆17Updated 5 years ago