Analysis pipeline to model tumour clonal evolution from WGS data (driver annotation, quality control of copy number calls, subclonal and mutational signature deconvolution)
☆22Sep 25, 2026Updated this week
Alternatives and similar repositories for tumourevo
Users that are interested in tumourevo are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- An analysis pipeline for Nanostring nCounter expression data.☆18Sep 11, 2026Updated 2 weeks ago
- ☆12Apr 25, 2024Updated 2 years ago
- Experimental plugin to integrate GPT like prompt into Nextflow☆17Apr 15, 2024Updated 2 years ago
- SelectiOn in PRotein ANnotated regiOns. Adapted dN/dS based method to detect selection in specific protein regions☆12Sep 10, 2026Updated 2 weeks ago
- Bioinformatics analysis pipeline for the functional annotation and translation of somatic SNVs/InDels and copy number abberations for pre…☆16Sep 1, 2026Updated 3 weeks ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Probabilistic Machine Learning course lab @UNITS☆20Jun 16, 2022Updated 4 years ago
- Recommendations to contenarized your bioinformatics software☆12May 30, 2018Updated 8 years ago
- nf-core/references is a bioinformatics pipeline that build references, for multiple use cases☆23Updated this week
- DriverPower☆26Jan 18, 2025Updated last year
- A bioinformatics best-practice analysis pipeline for epitope prediction and annotation☆56Updated this week
- Data Science Operations (dso) command line tool☆49Jun 15, 2026Updated 3 months ago
- A bioinformatics best-practice analysis pipeline for the analysis of shallow whole genome sequencing (sWGS) data for the identification o…☆20Jul 15, 2026Updated 2 months ago
- Accucopy is a computational method that infers Allele-Specific Copy Number alterations from low-coverage low-purity tumor sequencing data…☆16Mar 6, 2024Updated 2 years ago
- Custom code for processing Parse Bio snRNA-seq data generated by the Mortazavi lab at UCI☆22Oct 5, 2025Updated 11 months ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- ☆18Jan 30, 2023Updated 3 years ago
- Irons out wrinkles in noisy coverage data using robust PCA☆15May 14, 2025Updated last year
- Tip and tricks for VCF files☆21Sep 26, 2018Updated 8 years ago
- A Shiny-based framework to analyze and visualize interactively genomic data☆11May 11, 2023Updated 3 years ago
- ☆19Updated this week
- Python-based framework for computational immunomics☆15Jun 11, 2026Updated 3 months ago
- Regulatory Temporal Interaction Network Inference☆16Mar 11, 2026Updated 6 months ago
- Sito web del corso "LABORATORIO DI PROGRAMMAZIONE I" per Intelligenza Artificiale e per Statistica dell'Università degli studi di Trieste…☆20Aug 6, 2025Updated last year
- A shiny app for metacell analysis☆11Updated this week
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- A library for manipulating bioinformatics sequencing formats in Apache Spark☆35May 6, 2026Updated 4 months ago
- Pipeline for testing shifts in poly(A) tail lengths estimated by nanopolish☆10May 5, 2020Updated 6 years ago
- A comprehensive cancer DNA/RNA analysis and reporting pipeline☆122Updated this week
- DeCiFer is an algorithm that simultaneously selects mutation multiplicities and clusters SNVs by their corresponding descendant cell frac…☆22May 21, 2024Updated 2 years ago
- Merging, Annotation, Validation, and Illustration of Structural variants☆76Aug 22, 2023Updated 3 years ago
- The Genome Analysis Tutorial Page.☆12Oct 5, 2019Updated 6 years ago
- Conveniently perform ASCAT copy-number analysis from Tumor-Normal or Tumor only BAM files in R☆14Dec 6, 2021Updated 4 years ago
- Nanopore 3' end-capture sequencing (Begik et al., Nat Methods 2022)☆15Aug 18, 2026Updated last month
- Unified repository for the GA4GH Beacon v2 API standard☆34Updated this week
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- ☆14Apr 7, 2023Updated 3 years ago
- Pan gGnome Viewer☆10Updated this week
- Gene Expression Decomposition and Integration☆21Feb 9, 2026Updated 7 months ago
- Cancer Predisposition Sequencing Reporter (CPSR)☆66Sep 18, 2026Updated last week
- AESTETIK: Convolutional autoencoder for learning spot representations from spatial transcriptomics and morphology data☆28Aug 18, 2026Updated last month
- Filters for Next Generation Sequencing☆13Oct 31, 2024Updated last year
- A GA4GH Draft Beacon implementation☆11Oct 23, 2015Updated 10 years ago