Abismal is a mapper of FASTQ bisulfite-converted short reads (between 50 and 1000 bases) to a FASTA reference genome.
☆20Feb 9, 2026Updated 2 weeks ago
Alternatives and similar repositories for abismal
Users that are interested in abismal are comparing it to the libraries listed below
Sorting:
- Tools for analyzing DNA methylation data☆44Feb 15, 2026Updated last week
- Detects human contamination in bam files☆16Sep 10, 2020Updated 5 years ago
- WALT is a read mapping program for bisulfite sequencing DNA methylation studies.☆17Aug 23, 2022Updated 3 years ago
- Somatic coding and non-coding mutation enrichment analysis for tumor WGS data☆12Jun 16, 2021Updated 4 years ago
- BitMapperBS: a fast and accurate read aligner for whole-genome bisulfite sequencing☆31Sep 15, 2019Updated 6 years ago
- Structural Variation and fusion detection using targeted sequencing data from circulating cell free DNA☆29Jun 6, 2024Updated last year
- COMETgazer mehylation analysis software suite☆10Jul 21, 2019Updated 6 years ago
- MEM mapper prototype☆13Nov 28, 2020Updated 5 years ago
- Updated and optimized fork of BSMAP☆23Dec 28, 2020Updated 5 years ago
- BAMixChecker: A fast and efficient tool for sample matching checkup☆15Jun 12, 2022Updated 3 years ago
- analysis pipeline for CODEC data☆13Oct 27, 2025Updated 4 months ago
- ☆15Aug 22, 2023Updated 2 years ago
- Callable Cancer Loci - assessment of sequencing coverage for actionable and pathogenic loci in cancer☆21Dec 8, 2020Updated 5 years ago
- fast and accurate alignment of BS-Seq reads using bwa-mem and a 3-letter genome☆159Aug 8, 2025Updated 6 months ago
- ClaMSA (Classify Multiple Sequence Alignments).☆13Nov 21, 2024Updated last year
- Long Approximate Matches-based Split Aligner