sartorlab / methylSigLinks
R package for DNA methylation analysis
☆19Updated last year
Alternatives and similar repositories for methylSig
Users that are interested in methylSig are comparing it to the libraries listed below
Sorting:
- ☆38Updated 4 years ago
- ☆33Updated 10 months ago
- an R/Shiny application for interactive creation of non-circular plots of whole genomes☆45Updated 5 months ago
- novoBreak: local assembly for breakpoint detection in cancer genomes☆25Updated 7 years ago
- ☆23Updated 4 years ago
- Long read to rMATS☆32Updated 2 years ago
- DRAGEN Tumor/Normal workflow post-processing☆23Updated 2 years ago
- Flexible Bayesian inference of mutational signatures☆36Updated 2 years ago
- R package: TopDom - An efficient and Deterministic Method for identifying Topological Domains in Genomes☆21Updated 2 years ago
- ☆17Updated last year
- ☆18Updated 4 years ago
- Relative Abundance of Transcripts: An R package for the detection of Differential Transcript isoform Usage.☆34Updated 3 years ago
- Sashimi plots for RNA-seq data using detected transcripts☆29Updated 7 months ago
- Abismal is a mapper of FASTQ bisulfite-converted short reads (between 50 and 1000 bases) to a FASTA reference genome.☆19Updated 3 weeks ago
- R API for browsing, analyzing, and manipulating reference-aligned genome graphs in a GenomicRanges framework☆41Updated last month
- Version II of Mandalorion☆32Updated 6 years ago
- A program for summarising CpG methylation patterns☆20Updated 9 years ago
- ☆26Updated last year
- A comprehensive toolkit for mutational signature analysis☆40Updated last year
- A set of tools to annotate VCF files with expression and readcount data☆29Updated 7 months ago
- chimeraviz is an R package that automates the creation of chimeric RNA visualizations.☆38Updated last year
- A collection of tools to deal with Bisulfite-seq/NOMe-seq (SNP/Methylation calling: BisSNP; HMM segmentation: DMNTools; Visualization/Clu…☆32Updated 3 years ago
- ☆21Updated last year
- ☆23Updated 7 months ago
- Telomerecat: The telomere computational analysis tool☆21Updated 4 years ago
- DriverPower☆26Updated 9 months ago
- Motif manipulation functions for R.☆30Updated last month
- ☆23Updated 10 months ago
- gemBS is a bioinformatics pipeline designed for high throughput analysis of DNA methylation from Whole Genome Bisulfite Sequencing data (…☆33Updated 3 years ago
- R package to easily generate "V-plots" of paired-end sequencing data over regions of interest☆11Updated last year