Nascent Transcription Processing Pipeline
☆25Sep 1, 2026Updated 2 weeks ago
Alternatives and similar repositories for nascent
Users that are interested in nascent are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Analysis pipeline for the identification of viral integration events in genomes using a chimeric read approach.☆19Jul 28, 2026Updated last month
- Automatically source dotenv files into your Nextflow scope☆10Mar 27, 2026Updated 5 months ago
- Pipeline to produce consensus reads using unique molecular indexes/barcodes (UMIs)☆29Updated this week
- Customer workshop materials☆19May 13, 2026Updated 4 months ago
- A modular, containerized pipeline for PRO-seq data processing☆13Mar 6, 2026Updated 6 months ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- Bioinformatics pipeline to identify differentially active transcription factors between conditions using expression and epigenetic data☆14Mar 12, 2024Updated 2 years ago
- rnasplice is a bioinformatics pipeline for RNA-seq alternative splicing analysis☆69Updated this week
- Experimental plugin to integrate GPT like prompt into Nextflow☆17Apr 15, 2024Updated 2 years ago
- Detecting Regulatory Elements using GRO-seq and PRO-seq☆42Apr 30, 2025Updated last year
- Pipeline to generate variant catalogues, a list of variants and their frequencies in a population, from whole genome sequences.☆13Jul 28, 2026Updated last month
- An analysis pipeline for Nanostring nCounter expression data.☆18Sep 11, 2026Updated last week
- nf-test utility functions☆13Updated this week
- UNDER DEVELOPMENT--- Analysis of long non-coding RNAs from RNA-seq datasets☆34Jul 28, 2026Updated last month
- A nextflow pipeline for calling and annotating small germline variants from short DNA reads for WES and WGS data☆13Sep 9, 2026Updated last week
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- CAGE-sequencing analysis pipeline with trimming, alignment and counting of CAGE tags.☆11Sep 11, 2026Updated last week
- Please consider using/contributing to https://github.com/nf-core/sarek☆41Jul 13, 2021Updated 5 years ago
- Demultiplexing pipeline for sequencing data☆60Updated this week
- Preprocesses and Aligns Run-On Sequencing (PRO/GRO/ChRO-seq) data from Single-Read or Paired-End Illumina Sequencing☆31Dec 13, 2024Updated last year
- A small-RNA sequencing analysis pipeline☆101Updated this week
- RNA-seq analysis pipeline for detection of gene-fusions☆174Sep 11, 2026Updated last week
- Single-cell RNA-Seq pipeline for barcode-based protocols such as 10x, DropSeq or SmartSeq, offering a variety of aligners and empty-dropl…☆356Updated this week
- Analysis of Chromosome Conformation Capture data (Hi-C)☆112Sep 1, 2026Updated 2 weeks ago
- Pipeline for the identification of (coding) gene structures in draft genomes.☆44Jul 28, 2026Updated last month
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- ATAC-seq peak-calling and QC analysis pipeline☆229Sep 11, 2026Updated last week
- Proteomics label-free quantification (LFQ) analysis pipeline☆38Jan 13, 2025Updated last year
- CLI tool to verify workflow reproducibility☆17Jan 29, 2024Updated 2 years ago
- Python implementation and field-tool for automated pipeline launching through Tower CLI (beta)☆36Aug 10, 2026Updated last month
- Workflow for MAG quality assessment and taxonomical annotation.☆15May 26, 2026Updated 3 months ago
- ChIP-seq peak-calling, QC and differential analysis pipeline.☆246Sep 11, 2026Updated last week
- Precision HLA typing from next-generation sequencing data☆81Updated this week
- circRNA quantification, differential expression analysis and miRNA target prediction of RNA-Seq data☆61Sep 11, 2026Updated last week
- Take command of your set enrichment analyses.☆23Updated this week
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- A GitHub action to install Nextflow☆31Aug 20, 2026Updated last month
- Converts bam or cram files to fastq format and does quality control.☆32Updated this week
- A bioinformatics best-practice analysis pipeline for calling structural variants (SVs), copy number variants (CNVs) and repeat region exp…☆28Sep 9, 2026Updated last week
- gkmSVM R package☆17Aug 31, 2026Updated 2 weeks ago
- Nextflow plugin to render provenance reports for pipeline runs. Supports standard formats such as BioCompute Object and Workflow Run RO-C…☆31May 17, 2026Updated 4 months ago
- Please consider using/contributing to https://github.com/nf-core/sarek☆18Jan 3, 2019Updated 7 years ago
- QuasiModo: Assessing viral genomic analysis methods on HCMV strain mixture☆12Sep 22, 2022Updated 3 years ago