Alternatives and similar repositories for funimag

Users that are interested in funimag are comparing it to the libraries listed below

• ikinsella / locaNMF
  Pytorch implementation of LocaNMF
  ☆36Updated 5 years ago
• cunningham-lab / neurocaas
  IaC codebase for the NeuroCAAS Platform
  ☆37Updated last year
• MLspike / spikes
  spike extraction from calcium signals (Deneux et al., 2016)
  ☆30Updated 5 years ago
• NTCColumbia / moco
  motion correction
  ☆17Updated 2 years ago
• RichieHakim / ROICaT
  Region Of Interest Classification and Tracking
  ☆19Updated this week
• int-brain-lab / ibl-neuropixel
  Collection of tools to handle Neuropixel 1.0 and 2.0 data
  ☆15Updated 2 weeks ago
• mikarubi / voluseg
  pipeline for volumetric cell segmentation
  ☆12Updated 2 months ago
• ransona / ROIMatchPub
  Match suite2p ROIs between imaging sessions
  ☆25Updated 6 years ago
• llerussell / Naparm
  Control and design of two-photon photostimulation experiments
  ☆16Updated last year
• MouseLand / EnsemblePursuit
  ☆9Updated 5 years ago
• adamcohenlab / invivo-imaging
  Denoising and Demixing Pipeline for in vivo Voltage Imaging Data (SGPMD-NMF)
  ☆15Updated 2 years ago
• gardner-lab / FinchScope
  Single photon tools for Neuroscience
  ☆35Updated last year
• zivlab / island
  Revealing neural correlates of behavior without behavioral measurements
  ☆14Updated 5 years ago
• porteralab / EZcalcium
  Calcium Data Extraction and Analysis
  ☆44Updated 2 years ago
• bahanonu / imaging_tools
  A table containing imaging analysis tools for biology, with a focus on calcium imaging.
  ☆49Updated last year
• kohth / cilds
  Dimensionality reduction of calcium-imaged neuronal population activity
  ☆14Updated 2 years ago
• j-friedrich / OASIS
  Deconvolution of calcium imaging data
  ☆95Updated 4 months ago
• adamshch / SEUDO
  ☆8Updated 3 years ago
• cwindolf / dartsort
  ☆21Updated last week
• YijunBao / Shallow-UNet-Neuron-Segmentation_SUNS
  ☆17Updated 2 years ago
• joao-semedo / communication-subspace
  Code for "Cortical areas interact through a communication subspace", Semedo et al. (Neuron, 2019)
  ☆46Updated 5 years ago
• zebrain-lab / Toolbox-Romano-et-al
  Computational toolbox for analysis of calcium imaging data of neuronal populations
  ☆33Updated last year
• SWC-Advanced-Microscopy / BakingTray
  Serial-section automated anatomy extension for ScanImage
  ☆13Updated 3 weeks ago
• kushalkolar / MESmerize
  Platform for Calcium Imaging analysis. DEPRECATED.
  ☆60Updated last year
• zhoupc / OASIS_matlab
  ☆36Updated 3 years ago
• nel-lab / FIOLA
  ☆34Updated 2 weeks ago
• llerussell / Bruker_PrairieLink
  Stream data from PrairieView into MATLAB to allow online processing and analysis
  ☆11Updated last year
• int-brain-lab / ibllib
  IBL core shared libraries
  ☆63Updated this week
• calebweinreb / SNUB
  ☆27Updated 10 months ago
• bermanlabemory / motionmapperpy
  Modified Python 3.0 implementation of MotionMapper (https://github.com/gordonberman/MotionMapper)
  ☆29Updated last year