Repo for the CZI Imaging Team's napari plugin Alfa Cohort collaboration
☆11May 14, 2021Updated 5 years ago
Alternatives and similar repositories for napari-plugin-alfa-cohort
Users that are interested in napari-plugin-alfa-cohort are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- A curated list of awesome Janelia software☆17Feb 26, 2025Updated last year
- The repository of NEUBIAS textbook 2021☆10Jan 24, 2022Updated 4 years ago
- simple package for augmentation of n-dimensional arrays☆33Aug 10, 2023Updated 2 years ago
- Visualizing feature measurements on label images in napari☆10Jul 24, 2024Updated last year
- ☆22Aug 17, 2023Updated 2 years ago
- Serverless GPU API endpoints on Runpod - Get Bonus Credits • AdSkip the infrastructure headaches. Auto-scaling, pay-as-you-go, no-ops approach lets you focus on innovating your application.
- Various parts made for fluorescence microscopy + optics work☆18Jul 22, 2019Updated 6 years ago
- Napari plugin for custom analysis and visualization of lattice lightsheet and Oblique Plane Microscopy data. The plugin is optimized for …☆15Updated this week
- GUI to compute and explore receptive fields, primarily from calcium imaging recordings☆13Jun 26, 2021Updated 5 years ago
- Create movies from series of key-frames in napari.☆38May 24, 2021Updated 5 years ago
- a free, open-source web app for annotating, training, and evaluating image understanding algorithms☆25Nov 23, 2021Updated 4 years ago
- A Fiji/ImageJ plugin to generate ROIs from label images, allowing ROI erosion and quantification☆23Sep 11, 2021Updated 4 years ago
- Python-based module for extracting from, converting between, and handling optical imaging data from several file formats. Inspired by Spi…☆18Updated this week
- A Java software package to generate realistic 3D microscope Point-Spread Function (PSF)☆19Jul 16, 2019Updated 7 years ago
- A collection of demonstration materials for MorphoLibJ.☆12Jan 12, 2023Updated 3 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- A proof of concept to run python segmentations and recovering the results within QuPath☆19Feb 13, 2021Updated 5 years ago
- A JupyterBook site for napari workshop materials☆10Jul 11, 2022Updated 4 years ago
- Paint segmentations directly to on-disk/remote zarr arrays☆16Mar 25, 2026Updated 3 months ago
- Prototype implementation of napari-integrated CNN training viewer☆14Dec 27, 2024Updated last year
- Generate markdown notebooks from ImageJ Macro☆27Mar 17, 2021Updated 5 years ago
- A plugin based on scikit-image for segmenting nuclei and cells based on fluorescent microscopy images with high intensity in nuclei and/o…☆31May 1, 2025Updated last year
- 4D reconstruction of developmental trajectories using spherical harmonics☆23Mar 25, 2025Updated last year
- mcib3d core library for 3D ImageJ suite☆16Oct 6, 2022Updated 3 years ago
- Lectures for a napari training course☆52Aug 30, 2023Updated 2 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- Curated metadata for all studies published in the Image Data Resource☆16May 19, 2026Updated 2 months ago
- Fast writing of numpy 3d-arrays into HDF5 Fiji/BigDataViewer files.☆34Aug 22, 2024Updated last year
- SplineDist: Automated Cell Segmentation with Spline Curves☆74Sep 29, 2024Updated last year
- Gamified image segmentation quality estimation☆19May 1, 2025Updated last year
- A napari Plugin for visualisaton of pixel values over time (t+ nD) as graphs.☆14Apr 24, 2024Updated 2 years ago
- ☆24Aug 27, 2020Updated 5 years ago
- A GUI built on brainrender: visualise brain regions, neurons and labelled cells.☆12Nov 26, 2020Updated 5 years ago
- Cookiecutter for napari plugins☆73Nov 6, 2024Updated last year
- Visualise brainreg registration output☆10Nov 20, 2021Updated 4 years ago
- Bare Metal GPUs on DigitalOcean Gradient AI • AdPurpose-built for serious AI teams training foundational models, running large-scale inference, and pushing the boundaries of what's possible.
- ☆15Mar 10, 2020Updated 6 years ago
- ilastik plugin for napari☆15Mar 2, 2026Updated 4 months ago
- 3-D imaging visualisation through slicing☆31Jan 14, 2025Updated last year
- ☆21Updated this week
- A napari plugin for stitching large multi-positioning datasets in 2/3D+t using multiview-stitcher☆19Updated this week
- Linking napari layers with Matplotlib plots☆45Jul 1, 2026Updated 2 weeks ago
- How to use Aligning Big Brains and Atlases with Python☆14May 3, 2023Updated 3 years ago