Alternatives and similar repositories for trefide:

Users that are interested in trefide are comparing it to the libraries listed below

• jewellsean / FastLZeroSpikeInference
  Fast Exact Spike Inference Via L0 Optimization
  ☆15Updated 4 years ago
• mukamel-lab / CellSort
  This toolbox includes routines for using principal component analysis (PCA) and independent component analysis (ICA) to extract cellular …
  ☆25Updated 6 years ago
• int-brain-lab / mtscomp
  Multichannel time series lossless compression in pure Python based on NumPy and zlib
  ☆36Updated 5 months ago
• ikinsella / locaNMF
  Pytorch implementation of LocaNMF
  ☆34Updated 4 years ago
• paninski-lab / funimag
  Compression, denoising and demixing of functional imaging recordings
  ☆28Updated 6 years ago
• project-improv / improv
  Adaptive Platform for Neuroscience Experiments
  ☆39Updated last month
• calebweinreb / SNUB
  ☆25Updated 6 months ago
• cunningham-lab / neurocaas
  IaC codebase for the NeuroCAAS Platform
  ☆35Updated last year
• sophie63 / FlyLFM
  This repository contains code used for the fly brain activity experiments
  ☆15Updated last year
• kohth / cilds
  Dimensionality reduction of calcium-imaged neuronal population activity
  ☆14Updated last year
• j-friedrich / OASIS
  Deconvolution of calcium imaging data
  ☆86Updated last week
• llerussell / PyBehaviour
  Software and hardware for control of operant conditioning behavioural experiments
  ☆9Updated last year
• flatironinstitute / spikeforest_old
  SpikeForest -- spike sorting analysis for website
  ☆16Updated 4 years ago
• catalystneuro / roiextractors
  Python-based module for extracting from, converting between, and handling optical imaging data from several file formats. Inspired by Spi…
  ☆13Updated this week
• tensionhead / pyBOAT
  A Biological Oscillations Analysis Toolkit
  ☆18Updated this week
• paninski-lab / yass
  YASS: Yet Another Spike Sorter
  ☆65Updated 2 years ago
• epnev / continuous_time_ca_sampler
  The code takes as an input a time series vector of calcium observationsand produces samples from the posterior distribution of the underl…
  ☆19Updated 8 years ago
• MouseLand / EnsemblePursuit
  ☆9Updated 4 years ago
• RichieHakim / ROICaT
  Region Of Interest Classification and Tracking
  ☆16Updated this week
• zhoupc / OASIS_matlab
  ☆33Updated 3 years ago
• nel-lab / FIOLA
  ☆32Updated last year
• MouseLand / stringer-pachitariu-et-al-2018a
  Recordings of 10k neurons during spontaneous behaviors
  ☆50Updated 9 months ago
• MetaCell / nwb-explorer
  NWB Explorer is a web application to visualise and analyse the content of NWB:N 2 files
  ☆24Updated last week
• int-brain-lab / iblrig
  Main repository for IBL rig code
  ☆21Updated this week
• pillowlab / BinaryPursuitSpikeSorting
  Detect synchronous and overlapped spikes in extracellular recordings using Binary Pursuit (Pillow et al 2013)
  ☆13Updated 10 years ago
• flatironinstitute / figurl
  Shareable, interactive scientific figures in the cloud
  ☆35Updated last month
• AllenInstitute / neuroglia
  a Python machine learning library for neurophysiology data
  ☆36Updated 6 years ago
• Leveltlab / SpectralSegmentation
  Open source ca imaging processing tools to aquire neural traces from 2 photon image sequences
  ☆12Updated this week
• catalystneuro / neuroconv
  Create NWB files by converting and combining neural data in proprietary formats and adding essential metadata.
  ☆53Updated this week
• cortex-lab / alyx
  Database for experimental neuroscience laboratories
  ☆45Updated this week