FlowRegSuite / flow_registrationLinks
Flow-Registration toolbox for 2P motion compensation
☆26Updated 2 months ago
Alternatives and similar repositories for flow_registration
Users that are interested in flow_registration are comparing it to the libraries listed below
Sorting:
- A table containing imaging analysis tools for biology, with a focus on calcium imaging.☆53Updated 2 years ago
- An event-based tool for analyzing and quantifying calcium or neurotransmitter imaging data☆54Updated last year
- Open source ca imaging processing tools to aquire neural traces from 2 photon image sequences☆13Updated last week
- Image processing pipeline to correct motion artifacts and complex image distortions in neuronal calcium imaging data.☆26Updated last year
- Activity Quantification and Analysis for molecular spatiotemporal signals☆30Updated 2 months ago
- motion correction☆17Updated 2 years ago
- Calcium Data Extraction and Analysis☆47Updated 2 years ago
- A 2D-3D histological brain slice registration application for mouse, rat, zebrafish brains.☆36Updated last year
- ☆34Updated 6 months ago
- Repo for CCN workshop on caiman and mesmerize in January 2023☆13Updated 2 years ago
- Platform for Calcium Imaging analysis. DEPRECATED.☆62Updated last year
- ClearMap is a python toolbox for the analysis and registration of volumetric data from cleared tissues.☆53Updated 5 years ago
- ☆45Updated 5 years ago
- Serial-section automated anatomy extension for ScanImage☆17Updated last week
- A tool for manual pointwise deformable registration using bigdataviewer.☆33Updated last month
- A python package which aligns histology to the Allen Brain Atlas and Waxholm rat atlas using deep learning.☆106Updated 3 months ago
- ☆41Updated 4 years ago
- ☆18Updated 3 years ago
- Brainways☆21Updated 2 months ago
- CIAtah (pronounced cheetah): a software package for calcium imaging analysis of one- and two-photon imaging datasets. Documentation: http…☆99Updated last year
- ABBA - Aligning Big Brains and Atlases (2D sections to 3D atlas registration)☆54Updated last week
- Rendering anatomical heatmaps with brainrender and matplotlib☆46Updated 2 weeks ago
- Z-Brain Viewer and Analysis Scripts for MAP-Mapping☆24Updated 7 months ago
- ☆17Updated 2 years ago
- Denoising and Demixing Pipeline for in vivo Voltage Imaging Data (SGPMD-NMF)☆15Updated 2 years ago
- Accurate denoising of voltage imaging data through statistically unbiased prediction, Nature Methods.☆91Updated 3 months ago
- Compression, denoising and demixing of functional imaging recordings☆28Updated 7 years ago
- BIRDS plug-in on Fiji and attached jar package☆20Updated 4 years ago
- ☆20Updated 7 years ago
- Collaborative Approach for eNhanced Denoising under Low-light Excitation☆20Updated 5 months ago