gloewing / photometry_FLMMLinks
Code for Functional Mixed Models for Fiber Photometry
☆15Updated 6 months ago
Alternatives and similar repositories for photometry_FLMM
Users that are interested in photometry_FLMM are comparing it to the libraries listed below
Sorting:
- Ephys toolbox to match single units (electrophysiology) either within the same day (over splits) or across two days☆73Updated 3 weeks ago
- Neuropixels trajectory explorer with the Allen CCF mouse atlas☆80Updated 9 months ago
- pyqt5 dependent applications for IBL sessions☆32Updated 2 weeks ago
- Code implements the LN model used to describe spike trains of MEC neurons based on the animal's position, head direction, speed, and thet…☆23Updated 3 years ago
- Create NWB files by converting and combining neural data in proprietary formats and adding essential metadata.☆71Updated last week
- NeuroPyxels (npyx) is a python library built for electrophysiologists using Neuropixels electrodes. This package stems from the need of a…☆140Updated 3 weeks ago
- Neuropixels case for chronic recordings in freely moving mice.☆19Updated 6 years ago
- Functions to assess quality of spike sorting results☆34Updated 2 years ago
- "Approaches to Study Neural Circuits" course☆65Updated last year
- NEural MOdelS, a statistical modeling framework for neuroscience.☆119Updated this week
- Revealing neural correlates of behavior without behavioral measurements☆16Updated 6 years ago
- CodeOcean capsule for full electrophysiology analysis pipeline using Kilosort2.5 via SpikeInterface.☆13Updated 2 years ago
- The Freely Moving Animal (FMA) Toolbox is a Matlab toolbox. Its purpose is to help analyze electrophysiological and behavioral data recor…☆15Updated 4 years ago
- pynapple collaborative data analysis (high level python scripts)☆38Updated 2 months ago
- Neuroscience data analysis framework for reproducible research built by Loren Frank Lab at UCSF☆107Updated this week
- IBL core shared libraries☆66Updated this week
- WIP: Python port of Kilosort2☆50Updated 2 years ago
- CellExplorer is a graphical user interface, a standardized processing module and data structure for exploring and classifying single cell…☆111Updated 4 months ago
- A curated list of awesome Neuropixels resources.☆124Updated last month
- Utilities for managing Neuropixel datasets and Kilosort results☆48Updated 8 months ago
- Decoding and geometrical analysis of neural activity with built-in best practices☆46Updated 2 months ago
- Multi-probe trajectory planning in an intuitive 3D environment☆56Updated last month
- UnitRefine is a machine-learning toolbox that simplifies spike sorting curation by reducing manual curation.☆67Updated last month
- Python-based tools for pre-, post-processing, validating, and curating spike sorting datasets.☆50Updated 4 years ago
- Tutorials for using SpikeInterface on extracellular datasets.☆68Updated 2 years ago
- MATLAB toolbox for spike-train community detection☆15Updated last year
- miniscope analysis pipeline with interactive visualizations☆98Updated last year
- Multichannel time series lossless compression in pure Python based on NumPy and zlib☆43Updated 10 months ago
- Fiber photometry data preprocessing - denoising, photobleaching and motion correction.☆27Updated 2 years ago
- Code to reproduce figures for "Mice alternate between discrete strategies during perceptual decision-making" from Ashwood, Roy, Stone, IB…☆56Updated 2 years ago