gloewing / photometry_FLMMLinks
Code for Functional Mixed Models for Fiber Photometry
☆13Updated 2 months ago
Alternatives and similar repositories for photometry_FLMM
Users that are interested in photometry_FLMM are comparing it to the libraries listed below
Sorting:
- Ephys toolbox to match single units (electrophysiology) either within the same day (over splits) or across two days☆68Updated 2 weeks ago
- pyqt5 dependent applications for IBL sessions☆29Updated this week
- Functions to assess quality of spike sorting results☆34Updated 2 years ago
- pynapple collaborative data analysis (high level python scripts)☆37Updated last year
- NeuroPyxels (npyx) is a python library built for electrophysiologists using Neuropixels electrodes. This package stems from the need of a…☆134Updated 3 months ago
- Neuropixels trajectory explorer with the Allen CCF mouse atlas☆77Updated 5 months ago
- Code implements the LN model used to describe spike trains of MEC neurons based on the animal's position, head direction, speed, and thet…☆23Updated 3 years ago
- "Approaches to Study Neural Circuits" course☆66Updated 9 months ago
- NEural MOdelS, a statistical modeling framework for neuroscience.☆106Updated this week
- Utilities for managing Neuropixel datasets and Kilosort results☆49Updated 4 months ago
- Revealing neural correlates of behavior without behavioral measurements☆15Updated 5 years ago
- Create NWB files by converting and combining neural data in proprietary formats and adding essential metadata.☆65Updated this week
- Python package to handle probe layout, geometry and wiring to device.☆72Updated this week
- IBL core shared libraries☆63Updated this week
- WIP: Python port of Kilosort2☆50Updated 2 years ago
- miniscope analysis pipeline with interactive visualizations☆95Updated last year
- ☆52Updated last year
- Code for "Cortical areas interact through a communication subspace", Semedo et al. (Neuron, 2019)☆47Updated 6 years ago
- A curated list of awesome Neuropixels resources.☆113Updated 3 weeks ago
- Histology processing☆70Updated 3 weeks ago
- Decoding and geometrical analysis of neural activity with built-in best practices☆45Updated 6 months ago
- Neuroscience data analysis framework for reproducible research built by Loren Frank Lab at UCSF☆103Updated this week
- Code for internal lab sharing - polishing has started but is by no means complete☆129Updated last year
- A MATLAB toolbox for running behavioral neuroscience experiments and managing data☆32Updated last year
- ☆18Updated last year
- Multi-probe trajectory planning in an intuitive 3D environment☆56Updated this week
- CodeOcean capsule for full electrophysiology analysis pipeline using Kilosort2.5 via SpikeInterface.☆12Updated last year
- CellExplorer is a graphical user interface, a standardized processing module and data structure for exploring and classifying single cell…☆109Updated last week
- The Freely Moving Animal (FMA) Toolbox is a Matlab toolbox. Its purpose is to help analyze electrophysiological and behavioral data recor…☆12Updated 4 years ago
- Tutorials for using SpikeInterface on extracellular datasets.☆66Updated last year