Repo for CCN workshop on caiman and mesmerize in January 2023
☆12Mar 3, 2023Updated 3 years ago
Alternatives and similar repositories for CCN_caiman_mesmerize_workshop_2023
Users that are interested in CCN_caiman_mesmerize_workshop_2023 are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- High level pandas-based API for batch analysis of Calcium Imaging data using CaImAn☆69Apr 23, 2026Updated 2 weeks ago
- Voltage imaging analysis in python☆10May 25, 2021Updated 4 years ago
- ☆18Feb 1, 2024Updated 2 years ago
- ☆33May 19, 2025Updated 11 months ago
- DataJoint Element for multi-photon calcium imaging analysis with CaImAn, Suite2p, and EXTRACT☆15May 20, 2025Updated 11 months ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Repository for collecting materials from nwb hackathons☆25Nov 7, 2025Updated 6 months ago
- Tools to process widefield data☆12Jul 20, 2021Updated 4 years ago
- ☆19Jul 27, 2023Updated 2 years ago
- Matlab package implementing blind deconvolution method for neural spike recovery☆14Sep 20, 2016Updated 9 years ago
- AIND pipeline for processing extracellular electrophysiology data☆34Apr 24, 2026Updated 2 weeks ago
- Python scripts for simulating the Balanced Sequence Generator (BSG) introduced in the paper "Movement is governed by rotational neural dy…☆11Oct 21, 2022Updated 3 years ago
- Platform for Calcium Imaging analysis. DEPRECATED.☆62Nov 26, 2023Updated 2 years ago
- LightFlow: An intuitive, user-friendly framework for optics and photonics simulations, designed for educational and research applications…☆12Sep 8, 2023Updated 2 years ago
- Create movies from series of key-frames in napari.☆38May 24, 2021Updated 4 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- spike extraction from calcium signals (Deneux et al., 2016)☆36Apr 9, 2020Updated 6 years ago
- 专为 Claude Code 设计的 Tushare Pro 金融数据技能包,支持 220+ 个接口,用自然语言获取 A 股行情、财务数据、宏观经济等金融数据。☆49Feb 14, 2026Updated 2 months ago
- Widgets for calcium imaging analysis visualization in notebooks☆14Oct 19, 2024Updated last year
- Calibrated inference of spiking from calcium ΔF/F data using deep networks☆161Feb 11, 2026Updated 2 months ago
- Analysis package for miniscope data☆15Dec 6, 2022Updated 3 years ago
- Files associated with the From Samples To Knowledge 2025 QuPath training course☆15Feb 6, 2026Updated 3 months ago
- Work towards creating a common JSON based format for compact network specification☆14Jan 6, 2026Updated 4 months ago
- Code published with the paper J. Mölter, L. Avitan, and G. J. Goodhill. "Detecting neural assemblies in calcium imaging data". BMC Biolog…☆11Apr 30, 2019Updated 7 years ago
- Computational toolbox for large scale Calcium Imaging Analysis, including movie handling, motion correction, source extraction, spike dec…☆721Apr 16, 2026Updated 3 weeks ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- ☆13Aug 7, 2020Updated 5 years ago
- my dissertation!☆11Sep 6, 2022Updated 3 years ago
- Image processing pipeline to correct motion artifacts and complex image distortions in neuronal calcium imaging data.☆28Dec 21, 2023Updated 2 years ago
- Real-Time Light Field 3D Microscopy via Sparsity-Driven Learned Deconvolution☆11Nov 2, 2022Updated 3 years ago
- Linear algebra utilities for Python☆13Oct 28, 2025Updated 6 months ago
- ☆20Aug 17, 2020Updated 5 years ago
- Code for Functional Mixed Models for Fiber Photometry☆17Jul 30, 2025Updated 9 months ago
- Repository for reproducing results in Lauer et al. 2022☆21Aug 1, 2022Updated 3 years ago
- 2D image registration in python, using napari.☆16Dec 7, 2021Updated 4 years ago
- End-to-end encrypted email - Proton Mail • AdSpecial offer: 40% Off Yearly / 80% Off First Month. All Proton services are open source and independently audited for security.
- Calcium Data Extraction and Analysis☆49Dec 5, 2022Updated 3 years ago
- A napari plugin to load & deskew folders of lattice light sheet TIFFs☆13Jan 5, 2026Updated 4 months ago
- MATLAB analysis functions for Miniscope project.☆19Mar 16, 2017Updated 9 years ago
- A step-by-step introduction to deep learning (a.k.a. neural network) models for scientists and engineers.☆13Aug 28, 2022Updated 3 years ago
- A collection of useful MATLAB libraries☆16May 31, 2016Updated 9 years ago
- Zarr filesystem backend for N5☆19Apr 20, 2026Updated 2 weeks ago
- perspective-correct VR for freely moving animals engine☆17Mar 7, 2023Updated 3 years ago