Nondairy-Creamer / tmacLinks
Package for removing motion artifacts from two-channel imaging
☆11Updated 2 years ago
Alternatives and similar repositories for tmac
Users that are interested in tmac are comparing it to the libraries listed below
Sorting:
- Code package that allows meta analyses of unsupervised behavior results☆16Updated 4 months ago
- ☆18Updated last year
- Image processing pipeline to correct motion artifacts and complex image distortions in neuronal calcium imaging data.☆26Updated last year
- Code for Functional Mixed Models for Fiber Photometry☆13Updated 2 months ago
- Repository for BehaviorDEPOT pipeline app files and source code☆38Updated last year
- Tools to register histological section images and cell count locations to mouse brain atlas☆28Updated 3 years ago
- analysis tools for large-scale neural recordings☆15Updated 6 months ago
- ☆52Updated last year
- R Scripts to analyze deep lab cut point data and related data☆67Updated 2 years ago
- Ensembling and kalman smoothing for pose estimation☆27Updated 3 weeks ago
- Multi-probe trajectory planning in an intuitive 3D environment☆56Updated 3 weeks ago
- A gui for browsing joint calcium imaging + behavioral data.☆54Updated 8 months ago
- Supervised and unsupervised techniques to decode signals from a population of neurons: the case of head-direction cells.☆12Updated 5 years ago
- miniscope analysis pipeline with interactive visualizations☆95Updated last year
- Code published with the paper J. Mölter, L. Avitan, and G. J. Goodhill. "Detecting neural assemblies in calcium imaging data". BMC Biolog…☆12Updated 6 years ago
- Demo code for CAPTURE and DANNCE☆29Updated 4 years ago
- a Python API to record video & system timestamps from Imaging Source USB cameras☆67Updated 2 years ago
- Closed-loop behavioral experiment toolkit using pose estimation of body parts.☆60Updated 2 years ago
- Generate a matrix of predictors corresponding to different behavioral variables and process a regression-based encoding model to obtain t…☆18Updated 6 years ago
- Rendering anatomical heatmaps with brainrender and matplotlib☆44Updated 2 weeks ago
- Configurable acquisition from multiple FLIR/Point Grey camera using Bonsai and Python to h264 compress the video on the GPU.☆15Updated 7 months ago
- Variational Animal Motion Embedding - A tool for time series embedding and clustering☆34Updated 2 weeks ago
- An active learning platform for expert-guided, data efficient discovery of behavior.☆62Updated 3 months ago
- A MATLAB toolbox for running behavioral neuroscience experiments and managing data☆32Updated last year
- ☆28Updated last year
- Dimensionality reduction of calcium-imaged neuronal population activity☆16Updated 2 years ago
- Open-source stereotaxic coordinator☆15Updated 2 years ago
- Analysis of ultrasonic vocalizations from mice using computer vision and machine learning☆26Updated 2 years ago
- Platform for Calcium Imaging analysis. DEPRECATED.☆62Updated last year
- Histology processing☆70Updated 3 weeks ago