kristinbranson / APTLinks
Animal Part Tracker
☆82Updated this week
Alternatives and similar repositories for APT
Users that are interested in APT are comparing it to the libraries listed below
Sorting:
- a module for kinematic analysis of deeplabcut outputs☆142Updated last year
- Closed-loop behavioral experiment toolkit using pose estimation of body parts.☆58Updated 2 years ago
- A Bonsai interface for real-time markerless pose estimation using DeepLabCut☆51Updated last month
- Sample implementation of the MotionMapper behavioral analysis algorithms☆79Updated 4 years ago
- Demo code for CAPTURE and DANNCE☆29Updated 4 years ago
- Behavioral segmentation of open field in DeepLabCut, or B-SOID ("B-side"), is a pipeline that pairs unsupervised pattern recognition with…☆198Updated last year
- Framework for predicting neural activity from mouse orofacial movements tracked using a pose estimation model. Package also includes sing…☆169Updated 3 months ago
- Various scripts to support deeplabcut and what to do afterwards!☆155Updated 2 weeks ago
- AlphaTracker is a computer vision pipeline with the practical and real-time advantages , which requires minimal hardware requirements and…☆72Updated last year
- a Python API to record video & system timestamps from Imaging Source USB cameras☆67Updated 2 years ago
- Free, platform independent, behavior tracking software.☆136Updated 3 weeks ago
- A tool for drawing ROIs on videos and analysing deeplabcut videos.☆33Updated 4 years ago
- ☆111Updated 6 months ago
- A gui for browsing joint calcium imaging + behavioral data.☆52Updated 5 months ago
- Janelia Animal Behavior Detector☆81Updated this week
- ☆232Updated 2 months ago
- Modified Python 3.0 implementation of MotionMapper (https://github.com/gordonberman/MotionMapper)☆29Updated last month
- A modular package to control stimulation and track behaviour☆46Updated 8 months ago
- End-user version of the Mouse Action Recognition System (MARS)☆71Updated last year
- Variational Animal Motion Embedding - A tool for time series embedding and clustering☆190Updated 9 months ago
- miniscope analysis pipeline with interactive visualizations☆94Updated 11 months ago
- An active learning platform for expert-guided, data efficient discovery of behavior.☆59Updated last month
- Workshop material for using DeepLabCut☆145Updated last year
- TRex, a fast multi-animal tracking system with markerless identification, and 2D estimation of posture and visual fields.☆94Updated this week
- ☆52Updated 10 months ago
- GUI to run DeepLabCut on live video feed☆61Updated 9 months ago
- DeepLabCut based data analysis package including pose estimation and representation learning mediated behavior recognition☆45Updated 2 weeks ago
- DLC2Action is an action segmentation package that makes running and tracking of machine learning experiments easy.☆25Updated last year
- Configurable acquisition from multiple FLIR/Point Grey camera using Bonsai and Python to h264 compress the video on the GPU.☆14Updated 4 months ago
- Calibrated inference of spiking from calcium ΔF/F data using deep networks☆147Updated last month