Hennestad et al. 2022
☆23Apr 8, 2026Updated last week
Alternatives and similar repositories for NANSEN
Users that are interested in NANSEN are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- General information, resources and dicussions for the BrainGlobe project.☆11Feb 21, 2025Updated last year
- NDI (Neuroscience Data Interface) is a cross-platform interface standard for reading neuroscience data and storing the results of analyse…☆15Updated this week
- Serial-section automated anatomy extension for ScanImage☆18Mar 18, 2026Updated 3 weeks ago
- Build unbiased anatomical templates from individual images☆12Apr 8, 2026Updated last week
- A MATLAB toolbox for interacting with the Allen Brain Observatory☆22Mar 30, 2026Updated 2 weeks ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- Optical projection tomography microscope for isotropic whole-brain imaging☆16Jan 27, 2022Updated 4 years ago
- Registration to BrainGlobe atlases in napari using Elastix☆30Apr 8, 2026Updated last week
- Visualise brainreg registration output☆10Nov 20, 2021Updated 4 years ago
- A GUI built on brainrender: visualise brain regions, neurons and labelled cells.☆12Nov 26, 2020Updated 5 years ago
- brainglobe.info website☆15Apr 1, 2026Updated 2 weeks ago
- Utility to create a basic Python project structure with tests, CI etc.☆38Apr 8, 2026Updated last week
- ☆11Oct 21, 2025Updated 5 months ago
- Jax implementation of normcorre☆14Jan 25, 2025Updated last year
- Anatomical space conventions made easy.☆12Apr 8, 2026Updated last week
- Simple, predictable pricing with DigitalOcean hosting • AdAlways know what you'll pay with monthly caps and flat pricing. Enterprise-grade infrastructure trusted by 600k+ customers.
- ☆10Mar 15, 2023Updated 3 years ago
- Fancier logging with python.☆16Apr 8, 2026Updated last week
- DAQmx Examples using MATLAB☆30Feb 2, 2026Updated 2 months ago
- An event-based tool for analyzing and quantifying calcium or neurotransmitter imaging data☆56May 10, 2024Updated last year
- For laying organizational groundwork☆18Jul 12, 2020Updated 5 years ago
- A scientific publication, describing a way to improve microscopy. This repository hosts everything you need to reproduce our results. Rea…☆13Jun 22, 2024Updated last year
- How to use Aligning Big Brains and Atlases with Python☆14May 3, 2023Updated 2 years ago
- A table containing imaging analysis tools for biology, with a focus on calcium imaging.☆57Sep 15, 2023Updated 2 years ago
- A Python package to download neuronal morphologies☆18Apr 8, 2026Updated last week
- Wordpress hosting with auto-scaling - Free Trial • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- ☆34May 19, 2025Updated 10 months ago
- Utilities for formatting matplotlib figures☆31Feb 24, 2025Updated last year
- Re-usable GitHub Action scripts☆14Apr 8, 2026Updated last week
- Python-based module for extracting from, converting between, and handling optical imaging data from several file formats. Inspired by Spi…☆18Apr 8, 2026Updated last week
- Read and write files from the BrainGlobe neuroanatomy suite☆15Apr 9, 2026Updated last week
- Lightweight data specification for systems neuroscience, inspired by BIDS.☆21Dec 16, 2025Updated 3 months ago
- ☆19Apr 6, 2022Updated 4 years ago
- EXTRACT is a tractable and robust automated cell extraction tool for calcium imaging, which extracts the activities of cells as time seri…☆88Mar 11, 2026Updated last month
- A draft specification for the nifti-zarr format☆16Dec 5, 2025Updated 4 months ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- Fast, volumetric cell detection. In development.☆24Apr 9, 2026Updated last week
- Python module for registering and fusing multi-view microscopy data☆24Mar 8, 2025Updated last year
- Brainways☆23Aug 28, 2025Updated 7 months ago
- Standalone cellfinder cell detection algorithm☆20Jan 3, 2024Updated 2 years ago
- Nextflow pipeline encapsulating workflows for analyzing expansion lattice light-sheet microscopy (ExLLSM) imagery☆13Apr 10, 2025Updated last year
- Software for camera acquisition and tracking of particles☆11Nov 22, 2022Updated 3 years ago
- ABBA, controlled from python☆20Nov 24, 2025Updated 4 months ago