Hennestad et al. 2022
☆23May 18, 2026Updated last week
Alternatives and similar repositories for NANSEN
Users that are interested in NANSEN are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- General information, resources and dicussions for the BrainGlobe project.☆11Feb 21, 2025Updated last year
- NDI (Neuroscience Data Interface) is a cross-platform interface standard for reading neuroscience data and storing the results of analyse…☆15Updated this week
- Serial-section automated anatomy extension for ScanImage☆18Updated this week
- Build unbiased anatomical templates from individual images☆12May 5, 2026Updated 3 weeks ago
- A MATLAB toolbox for interacting with the Allen Brain Observatory☆22Mar 30, 2026Updated last month
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Optical projection tomography microscope for isotropic whole-brain imaging☆16Jan 27, 2022Updated 4 years ago
- Registration to BrainGlobe atlases in napari using Elastix☆29May 5, 2026Updated 3 weeks ago
- Visualise brainreg registration output☆10Nov 20, 2021Updated 4 years ago
- NIU website on common software problems and their troubleshooting☆10May 15, 2026Updated last week
- A GUI built on brainrender: visualise brain regions, neurons and labelled cells.☆12Nov 26, 2020Updated 5 years ago
- brainglobe.info website☆14Updated this week
- Utility to create a basic Python project structure with tests, CI etc.☆38May 5, 2026Updated 3 weeks ago
- ☆11Oct 21, 2025Updated 7 months ago
- Jax implementation of normcorre☆14Jan 25, 2025Updated last year
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- Anatomical space conventions made easy.☆12May 5, 2026Updated 3 weeks ago
- ☆10Mar 15, 2023Updated 3 years ago
- Collaborative Brain Wave Analysis Pipeline (Cobrawap)☆26Sep 25, 2025Updated 8 months ago
- Fancier logging with python.☆16May 8, 2026Updated 2 weeks ago
- An event-based tool for analyzing and quantifying calcium or neurotransmitter imaging data☆56May 10, 2024Updated 2 years ago
- For laying organizational groundwork☆18Jul 12, 2020Updated 5 years ago
- A scientific publication, describing a way to improve microscopy. This repository hosts everything you need to reproduce our results. Rea…☆13Jun 22, 2024Updated last year
- DAQmx Examples using MATLAB☆31Feb 2, 2026Updated 3 months ago
- How to use Aligning Big Brains and Atlases with Python☆14May 3, 2023Updated 3 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- A table containing imaging analysis tools for biology, with a focus on calcium imaging.☆57Sep 15, 2023Updated 2 years ago
- A Python package to download neuronal morphologies☆17May 5, 2026Updated 3 weeks ago
- ☆33May 19, 2025Updated last year
- Utilities for formatting matplotlib figures☆31Feb 24, 2025Updated last year
- Re-usable GitHub Action scripts☆14May 5, 2026Updated 3 weeks ago
- Python-based module for extracting from, converting between, and handling optical imaging data from several file formats. Inspired by Spi…☆18Updated this week
- Read and write files from the BrainGlobe neuroanatomy suite☆15May 5, 2026Updated 3 weeks ago
- Lightweight data specification for systems neuroscience, inspired by BIDS.☆21Dec 16, 2025Updated 5 months ago
- EXTRACT is a tractable and robust automated cell extraction tool for calcium imaging, which extracts the activities of cells as time seri…☆89Mar 11, 2026Updated 2 months ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- A draft specification for the nifti-zarr format☆16Dec 5, 2025Updated 5 months ago
- Fast, volumetric cell detection. In development.☆24May 13, 2026Updated last week
- ☆19Apr 6, 2022Updated 4 years ago
- Python module for registering and fusing multi-view microscopy data☆24Mar 8, 2025Updated last year
- Brainways☆23Aug 28, 2025Updated 8 months ago
- Standalone cellfinder cell detection algorithm☆20Jan 3, 2024Updated 2 years ago
- Nextflow pipeline encapsulating workflows for analyzing expansion lattice light-sheet microscopy (ExLLSM) imagery☆13Apr 15, 2026Updated last month