kohth / cildsLinks
Dimensionality reduction of calcium-imaged neuronal population activity
☆14Updated 2 years ago
Alternatives and similar repositories for cilds
Users that are interested in cilds are comparing it to the libraries listed below
Sorting:
- ☆38Updated 3 years ago
- Pytorch implementation of LocaNMF☆36Updated 5 years ago
- Code for "Cortical areas interact through a communication subspace", Semedo et al. (Neuron, 2019)☆46Updated 5 years ago
- ☆23Updated 5 years ago
- spike extraction from calcium signals (Deneux et al., 2016)☆30Updated 5 years ago
- ☆8Updated 3 years ago
- Compression, denoising and demixing of functional imaging recordings☆28Updated 6 years ago
- Tools to register histological section images and cell count locations to mouse brain atlas☆27Updated 3 years ago
- CIAtah (pronounced cheetah): a software package for calcium imaging analysis of one- and two-photon imaging datasets. Documentation: http…☆89Updated 7 months ago
- ☆28Updated 11 months ago
- Region Of Interest Classification and Tracking☆19Updated this week
- Revealing neural correlates of behavior without behavioral measurements☆14Updated 5 years ago
- Matlab codepack for performing dimensionality reduction on neural data using TD-GPFA or GPFA.☆20Updated 7 years ago
- Neuroscience/electrophsyiology data analysis tools (mostly Matlab)☆14Updated 6 years ago
- IaC codebase for the NeuroCAAS Platform☆37Updated last year
- Match suite2p ROIs between imaging sessions☆25Updated 6 years ago
- A MATLAB toolbox for running behavioral neuroscience experiments and managing data☆33Updated last year
- Code for Functional Mixed Models for Fiber Photometry☆11Updated last week
- Supervised and unsupervised techniques to decode signals from a population of neurons: the case of head-direction cells.☆12Updated 5 years ago
- Calcium Data Extraction and Analysis☆44Updated 2 years ago
- Algorithm for automated source extraction from 1P data☆20Updated 2 years ago
- Platform for Calcium Imaging analysis. DEPRECATED.☆60Updated last year
- Deconvolution of calcium imaging data☆96Updated 5 months ago
- Histology processing☆66Updated 2 weeks ago
- MATLAB toolbox for spike-train community detection☆15Updated last year
- Web app for viewing results of ephys spike sorting☆26Updated 3 months ago
- Machine Learning Methods for Neural Data Analysis☆16Updated last month
- A table containing imaging analysis tools for biology, with a focus on calcium imaging.☆49Updated last year
- motion correction☆17Updated 2 years ago
- Linear-Nonlinear-Poisson (LNP) model fitting via Maximally-Informative-Dimensions (MID) / maximum likelihood☆18Updated 7 years ago