Dimensionality reduction of calcium-imaged neuronal population activity
☆17Feb 1, 2023Updated 3 years ago
Alternatives and similar repositories for cilds
Users that are interested in cilds are comparing it to the libraries listed below
Sorting:
- Fast Automated Spike Tracker☆11Feb 27, 2019Updated 7 years ago
- website of the CSE 5339 class on TDA and Neuroscience☆12Apr 23, 2022Updated 3 years ago
- Denoising and Demixing Pipeline for in vivo Voltage Imaging Data (SGPMD-NMF)☆15Apr 24, 2023Updated 2 years ago
- Compression, denoising and demixing of functional imaging recordings☆28Jul 11, 2018Updated 7 years ago
- Matlab codepack for performing dimensionality reduction on neural data using TD-GPFA or GPFA.☆22Jul 30, 2017Updated 8 years ago
- Trend Filter Denoising☆21Jul 30, 2021Updated 4 years ago
- ☆41Sep 29, 2021Updated 4 years ago
- Deconvolution of calcium imaging data☆105Jan 21, 2025Updated last year
- Hennestad et al. 2022☆23Feb 18, 2026Updated last week
- ☆29Oct 22, 2025Updated 4 months ago
- Toolbox for analyzing behavioral videos and neural activity☆61Dec 3, 2023Updated 2 years ago
- Pytorch implementation of lfads, and hierarchical extension☆26Dec 2, 2021Updated 4 years ago
- Shareable, interactive scientific figures in the cloud☆38Sep 4, 2025Updated 5 months ago
- Automated cell tracking package for MATLAB☆11Feb 21, 2019Updated 7 years ago
- ANN4EEG is a convolutional neural network toolkit for EEG-mediated drug-target interaction prediction. This approach for drug-target inte…☆13Feb 15, 2024Updated 2 years ago
- ☆34May 19, 2025Updated 9 months ago
- Registration of cells across sessions.☆76Aug 20, 2024Updated last year
- CIAtah (pronounced cheetah): a software package for calcium imaging analysis of one- and two-photon imaging datasets. Documentation: http…☆99Nov 14, 2024Updated last year
- PhaseLAB is a Matlab toolbox to process QLSI interferograms and resulting wavefront images☆15Oct 31, 2024Updated last year
- Revisiting Whittaker-Henderson Smoothing☆11Jun 19, 2025Updated 8 months ago
- 科学计算Python2小时:使用Python来面对数学建模中一系列使用计算机解决实际问题的状况。☆13May 17, 2021Updated 4 years ago
- ☆10Feb 29, 2016Updated 10 years ago
- Urai AE, de Gee JW, Tsetsos K, Donner TH (2019) Choice history biases subsequent evidence accumulation. eLife☆15Jul 20, 2020Updated 5 years ago
- The official re-implementation of the Neurips 2021 paper, "Targeted Neural Dynamical Modeling".☆10Mar 4, 2022Updated 3 years ago
- Listen to the weather using Sonic Pi and data from Mathematica☆11Dec 6, 2018Updated 7 years ago
- An R toolbox for analysing movement across space and time☆10Jan 16, 2026Updated last month
- 为思源笔记提供一个可高度定制的信息聚合页面 Provide a highly customizable information aggregation page for Siyuan☆27Jan 13, 2026Updated last month
- siyuan-plugin-picture-library☆13Dec 2, 2025Updated 3 months ago
- Spectrogram-UMAP-based Temporal Link Embedding☆11Dec 22, 2023Updated 2 years ago
- An event-based tool for analyzing and quantifying calcium or neurotransmitter imaging data☆56May 10, 2024Updated last year
- Calcium Data Extraction and Analysis☆49Dec 5, 2022Updated 3 years ago
- A virtual-scanning framework based on deep neural network for light-field microscopy (LFM)☆17Nov 11, 2023Updated 2 years ago
- Code published with the paper J. Mölter, L. Avitan, and G. J. Goodhill. "Detecting neural assemblies in calcium imaging data". BMC Biolog…☆11Apr 30, 2019Updated 6 years ago
- GitHub Action for use with python package interrogate☆11Nov 12, 2024Updated last year
- R package containing the functions used to build the Database of Odor Responses☆11Feb 18, 2024Updated 2 years ago
- This is the implementation of the Recursive Nearest (Neighbor) Agglomeration☆11Oct 9, 2020Updated 5 years ago
- Manual spike clustering software for matlab☆14Jun 15, 2022Updated 3 years ago
- Interactive package for Short AsyNchronous Time-series Analysis (SANTA) in R, implemented in Shiny☆11Mar 6, 2024Updated last year
- Configurable acquisition from multiple FLIR/Point Grey camera using Bonsai and Python to h264 compress the video on the GPU.☆15Mar 7, 2025Updated 11 months ago