A minimal package for saving and reading large HDF5-based chunked arrays.
☆15Apr 12, 2022Updated 4 years ago
Alternatives and similar repositories for split_dataset
Users that are interested in split_dataset are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- How to use Aligning Big Brains and Atlases with Python☆14May 3, 2023Updated 3 years ago
- ABBA, controlled from python☆21Jul 22, 2026Updated last month
- Compression, denoising and demixing of functional imaging recordings☆31Jul 11, 2018Updated 8 years ago
- A JupyterBook site for napari workshop materials☆10Jul 11, 2022Updated 4 years ago
- Fancier logging with python.☆16Updated this week
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- ☆36May 19, 2025Updated last year
- Prototype implementation of napari-integrated CNN training viewer☆14Dec 27, 2024Updated last year
- Visualise brainreg registration output☆10Nov 20, 2021Updated 4 years ago
- Accelerated Pixel and Object Classifiers (APOC)☆61Aug 11, 2026Updated 2 weeks ago
- A GUI built on brainrender: visualise brain regions, neurons and labelled cells.☆12Nov 26, 2020Updated 5 years ago
- Nextflow pipeline encapsulating workflows for analyzing expansion lattice light-sheet microscopy (ExLLSM) imagery☆13Apr 15, 2026Updated 4 months ago
- A napari plugin to render BrainGlobe atlases and associated data as layers.☆24Aug 23, 2026Updated last week
- QuPath extension for Cellsparse☆19May 6, 2025Updated last year
- GPU Deconvolution Library with C and Matlab API for nVidia GPUs☆21Mar 2, 2019Updated 7 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Rust extension module for FIJI-like colormapping and channel blending☆21Jun 24, 2026Updated 2 months ago
- A framework for rapidly detecting and classifying objects and behaviour from motion☆28May 5, 2026Updated 3 months ago
- Rendering anatomical heatmaps with brainrender and matplotlib☆52Aug 23, 2026Updated last week
- Read and write files from the BrainGlobe neuroanatomy suite☆15Aug 23, 2026Updated last week
- Discover, install, and share napari plugins☆54Mar 6, 2026Updated 5 months ago
- NEural MOdelS, a statistical modeling framework for neuroscience.☆142Updated this week
- ABBA - Aligning Big Brains and Atlases (2D sections to 3D atlas registration)☆61Aug 12, 2026Updated 2 weeks ago
- Create movies from series of key-frames in napari.☆38May 24, 2021Updated 5 years ago
- Process images using SimpleITK in napari☆23May 1, 2025Updated last year
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- GPU-based 3D non-rigid volumetric registration☆49Aug 26, 2025Updated last year
- Flexible HDF5 saving/loading library forked from deepdish (University of Chicago) and maintained by the Portugues lab☆16Dec 6, 2024Updated last year
- Fork of Gogs (https://github.com/gogs/gogs) "a painless self-hosted Git service" with added features for research data management☆16Feb 25, 2023Updated 3 years ago
- Dataset EXploration & Processing☆33May 11, 2023Updated 3 years ago
- Code for "Neural Network-based Reconstruction in Compressed Sensing MRI Without Fully-sampled Training Data"☆12Jan 5, 2021Updated 5 years ago
- Linking napari layers with Matplotlib plots☆46Jul 1, 2026Updated last month
- A python algorithm for tracking cells in 3D deforming organs☆70Nov 13, 2025Updated 9 months ago
- Linear algebra utilities for Python☆13Oct 28, 2025Updated 10 months ago
- PSF simulation and 3D Deconvolution for Light-Field Microscopy in Julia☆12Dec 10, 2019Updated 6 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- MagellanMapper is a graphical interface for 3D bioimage annotation, atlas registration, and regional quantification☆22Mar 30, 2026Updated 4 months ago
- napari widgets for start-to-finish batch processing☆15Jun 1, 2026Updated 2 months ago
- ☆10Oct 1, 2019Updated 6 years ago
- X Correlation Forward Scattering Media☆10May 11, 2021Updated 5 years ago
- A step-by-step introduction to deep learning (a.k.a. neural network) models for scientists and engineers.☆13Aug 28, 2022Updated 4 years ago
- Managing Open and Reproducible Computational Projects☆12Jan 21, 2025Updated last year
- The python-microscopy environment - an open-source package for light microscopy☆100Updated this week