Alternatives and similar repositories for A-SOID

Users that are interested in A-SOID are comparing it to the libraries listed below

• neuroethology / bentoMAT
  A gui for browsing joint calcium imaging + behavioral data.
  ☆54Updated 9 months ago
• dattalab / keypoint-moseq
  ☆97Updated last week
• LINCellularNeuroscience / VAME
  Variational Animal Motion Embedding - A tool for time series embedding and clustering
  ☆193Updated last year
• AdaptiveMotorControlLab / DLC2Kinematics
  a module for kinematic analysis of deeplabcut outputs
  ☆144Updated last year
• DeNardoLab / BehaviorDEPOT
  Repository for BehaviorDEPOT pipeline app files and source code
  ☆38Updated last year
• umyelab / LabGym
  Quantify user-defined behaviors.
  ☆96Updated 2 weeks ago
• jbohnslav / deepethogram
  ☆114Updated 2 months ago
• YttriLab / B-SOID
  Behavioral segmentation of open field in DeepLabCut, or B-SOID ("B-side"), is a pipeline that pairs unsupervised pattern recognition with…
  ☆201Updated last year
• ETHZ-INS / BehaviorFlow
  Code package that allows meta analyses of unsupervised behavior results
  ☆17Updated 4 months ago
• MouseLand / facemap
  Framework for predicting neural activity from mouse orofacial movements tracked using a pose estimation model. Package also includes sing…
  ☆178Updated 3 months ago
• ThomasAkam / Point_Grey_Bonsai_multi_camera_acquisition
  Configurable acquisition from multiple FLIR/Point Grey camera using Bonsai and Python to h264 compress the video on the GPU.
  ☆15Updated 7 months ago
• ETHZ-INS / DLCAnalyzer
  R Scripts to analyze deep lab cut point data and related data
  ☆67Updated 2 years ago
• bermanlabemory / motionmapperpy
  Modified Python 3.0 implementation of MotionMapper (https://github.com/gordonberman/MotionMapper)
  ☆33Updated 4 months ago
• pyratlib / pyrat
  PyRat is a user friendly library in python to analyze data from the DeepLabCut. Developed to help researchers unfamiliar with programming…
  ☆52Updated last year
• Whitlock-Group / HERBS
  ☆52Updated last year
• mlfpm / deepof
  DeepLabCut based data analysis package including pose estimation and representation learning mediated behavior recognition
  ☆49Updated this week
• SchwarzNeuroconLab / DeepLabStream
  Closed-loop behavioral experiment toolkit using pose estimation of body parts.
  ☆60Updated 2 years ago
• DeepLabCut / DLCutils
  Various scripts to support deeplabcut and what to do afterwards!
  ☆156Updated 3 months ago
• djamesbarker / pMAT
  Fiber Photometry Modular Analysis Tool Suite
  ☆40Updated 4 years ago
• EthoML / VAME
  Variational Animal Motion Embedding - A tool for time series embedding and clustering
  ☆36Updated last month
• leomol / FPA
  Fiber photometry analysis
  ☆22Updated this week
• DeepLabCut / napari-deeplabcut
  a napari plugin for labeling and refining keypoint data within DeepLabCut projects
  ☆59Updated last month
• PolarBean / DLC_ROI_tool
  A tool for drawing ROIs on videos and analysing deeplabcut videos.
  ☆35Updated 4 years ago
• petersaj / AP_histology
  Histology processing
  ☆71Updated last month
• ksseverson57 / campy
  Python package for streaming video from multiple cameras to disk. Features real-time compression and debayering using FFmpeg.
  ☆46Updated 2 months ago
• VirtualBrainLab / Pinpoint
  Multi-probe trajectory planning in an intuitive 3D environment
  ☆56Updated 3 weeks ago
• denisecailab / ezTrack
  Free, platform independent, behavior tracking software.
  ☆139Updated 4 months ago
• neuroethology / MARS
  End-user version of the Mouse Action Recognition System (MARS)
  ☆75Updated last year
• zivlab / CellReg
  Registration of cells across sessions.
  ☆75Updated last year
• petersaj / neuropixels_trajectory_explorer
  Neuropixels trajectory explorer with the Allen CCF mouse atlas
  ☆78Updated 6 months ago