YttriLab / A-SOIDLinks
An active learning platform for expert-guided, data efficient discovery of behavior.
☆65Updated 6 months ago
Alternatives and similar repositories for A-SOID
Users that are interested in A-SOID are comparing it to the libraries listed below
Sorting:
- A gui for browsing joint calcium imaging + behavioral data.☆54Updated 11 months ago
- Quantify user-defined behaviors.☆101Updated 2 weeks ago
- Repository for BehaviorDEPOT pipeline app files and source code☆38Updated last year
- Variational Animal Motion Embedding - A tool for time series embedding and clustering☆198Updated last year
- ☆101Updated 2 months ago
- ☆115Updated 4 months ago
- Code package that allows meta analyses of unsupervised behavior results☆19Updated 6 months ago
- DeepLabCut based data analysis package including pose estimation and representation learning mediated behavior recognition☆51Updated last week
- a module for kinematic analysis of deeplabcut outputs☆148Updated 2 years ago
- a napari plugin for labeling and refining keypoint data within DeepLabCut projects☆60Updated 3 months ago
- Fiber Photometry Modular Analysis Tool Suite☆42Updated 4 years ago
- ☆52Updated last year
- Configurable acquisition from multiple FLIR/Point Grey camera using Bonsai and Python to h264 compress the video on the GPU.☆15Updated 9 months ago
- Fiber photometry analysis☆22Updated 3 weeks ago
- Closed-loop behavioral experiment toolkit using pose estimation of body parts.☆61Updated 2 years ago
- PyRat is a user friendly library in python to analyze data from the DeepLabCut. Developed to help researchers unfamiliar with programming…☆52Updated last year
- R Scripts to analyze deep lab cut point data and related data☆70Updated 2 years ago
- Python package for streaming video from multiple cameras to disk. Features real-time compression and debayering using FFmpeg.☆47Updated last month
- Image processing pipeline to correct motion artifacts and complex image distortions in neuronal calcium imaging data.☆26Updated 2 years ago
- ☆19Updated last year
- Behavioral segmentation of open field in DeepLabCut, or B-SOID ("B-side"), is a pipeline that pairs unsupervised pattern recognition with…☆203Updated last year
- Framework for predicting neural activity from mouse orofacial movements tracked using a pose estimation model. Package also includes sing…☆181Updated 5 months ago
- Histology processing☆71Updated last week
- Multi-probe trajectory planning in an intuitive 3D environment☆56Updated last month
- miniscope analysis pipeline with interactive visualizations☆96Updated last year
- Registration of cells across sessions.☆75Updated last year
- Variational Animal Motion Embedding - A tool for time series embedding and clustering☆39Updated 3 months ago
- SLEAP to Anipose triangulation pipeline for 3D multi-animal pose tracking.☆27Updated last year
- A tool for drawing ROIs on videos and analysing deeplabcut videos.☆35Updated 4 years ago
- Fully automated (rodent) limb motion analysis toolbox for behavioral analysis with bodypart coordinate data, building upon markerless pos…☆15Updated last month