Alternatives and similar repositories for A-SOID

Users that are interested in A-SOID are comparing it to the libraries listed below

• LINCellularNeuroscience / VAME
  Variational Animal Motion Embedding - A tool for time series embedding and clustering
  ☆190Updated 9 months ago
• dattalab / keypoint-moseq
  ☆91Updated last week
• neuroethology / bentoMAT
  A gui for browsing joint calcium imaging + behavioral data.
  ☆52Updated 5 months ago
• AdaptiveMotorControlLab / DLC2Kinematics
  a module for kinematic analysis of deeplabcut outputs
  ☆142Updated last year
• ETHZ-INS / BehaviorFlow
  Code package that allows meta analyses of unsupervised behavior results
  ☆16Updated last month
• amathislab / DLC2action
  DLC2Action is an action segmentation package that makes running and tracking of machine learning experiments easy.
  ☆25Updated last year
• umyelab / LabGym
  Quantify user-defined behaviors.
  ☆79Updated this week
• jbohnslav / deepethogram
  ☆111Updated 6 months ago
• EthoML / VAME
  Variational Animal Motion Embedding - A tool for time series embedding and clustering
  ☆29Updated last week
• ETHZ-INS / DLCAnalyzer
  R Scripts to analyze deep lab cut point data and related data
  ☆67Updated 2 years ago
• MouseLand / facemap
  Framework for predicting neural activity from mouse orofacial movements tracked using a pose estimation model. Package also includes sing…
  ☆169Updated 3 months ago
• ThomasAkam / Point_Grey_Bonsai_multi_camera_acquisition
  Configurable acquisition from multiple FLIR/Point Grey camera using Bonsai and Python to h264 compress the video on the GPU.
  ☆14Updated 4 months ago
• YttriLab / B-SOID
  Behavioral segmentation of open field in DeepLabCut, or B-SOID ("B-side"), is a pipeline that pairs unsupervised pattern recognition with…
  ☆198Updated last year
• pyratlib / pyrat
  PyRat is a user friendly library in python to analyze data from the DeepLabCut. Developed to help researchers unfamiliar with programming…
  ☆49Updated last year
• DeNardoLab / BehaviorDEPOT
  Repository for BehaviorDEPOT pipeline app files and source code
  ☆38Updated 9 months ago
• Whitlock-Group / HERBS
  ☆52Updated 10 months ago
• bermanlabemory / motionmapperpy
  Modified Python 3.0 implementation of MotionMapper (https://github.com/gordonberman/MotionMapper)
  ☆29Updated last month
• petersaj / AP_histology
  Histology processing
  ☆66Updated last month
• VirtualBrainLab / Pinpoint
  Multi-probe trajectory planning in an intuitive 3D environment
  ☆55Updated this week
• ksseverson57 / campy
  Python package for streaming video from multiple cameras to disk. Features real-time compression and debayering using FFmpeg.
  ☆46Updated 10 months ago
• dattalab / moseq2-app
  MoSeq2 Jupyter Notebook platform used to run all of the MoSeq2 tools in a GUI.
  ☆34Updated 5 months ago
• ryhattori / PatchWarp
  Image processing pipeline to correct motion artifacts and complex image distortions in neuronal calcium imaging data.
  ☆26Updated last year
• DeepLabCut / DLCutils
  Various scripts to support deeplabcut and what to do afterwards!
  ☆155Updated 2 weeks ago
• neuroethology / MARS
  End-user version of the Mouse Action Recognition System (MARS)
  ☆71Updated last year
• JingyiGF / HERBS
  ☆19Updated last year
• SchwarzNeuroconLab / DeepLabStream
  Closed-loop behavioral experiment toolkit using pose estimation of body parts.
  ☆58Updated 2 years ago
• neuroinformatics-unit / spikewrap
  A package to manage electrophysiology analysis.
  ☆23Updated this week
• EnnyvanBeest / UnitMatch
  Ephys toolbox to match single units (electrophysiology) either within the same day (over splits) or across two days
  ☆63Updated 2 weeks ago
• mlfpm / deepof
  DeepLabCut based data analysis package including pose estimation and representation learning mediated behavior recognition
  ☆45Updated 2 weeks ago
• petersenpeter / CellExplorer
  CellExplorer is a graphical user interface, a standardized processing module and data structure for exploring and classifying single cell…
  ☆103Updated 7 months ago