mossmatters / HybPiper
Recovering genes from targeted sequence capture data
☆115Updated last week
Alternatives and similar repositories for HybPiper:
Users that are interested in HybPiper are comparing it to the libraries listed below
- Fast calculation of Patterson's D (ABBA-BABA) and the f4-ratio statistics across many populations/species☆166Updated 3 weeks ago
- MitoZ: A toolkit for assembly, annotation, and visualization of animal mitochondrial genomes☆119Updated 2 months ago
- Effective selection of population size projection for construction of the site frequency spectrum. Convert VCF to dadi/fastsimcoal style …☆141Updated 5 months ago
- ☆70Updated last year
- Assembly of Phylogenomic Datasets from High-Throughput Sequencing data☆24Updated this week
- Version 5 of the CAFE phylogenetics software☆121Updated 2 months ago
- Best-fit model selection☆78Updated 9 months ago
- SMC++ infers population history from whole-genome sequence data.☆157Updated 11 months ago
- ClonalFrameML: Efficient Inference of Recombination in Whole Bacterial Genomes☆111Updated 7 months ago
- RADseq workflow using STACKS☆57Updated last month
- BUSCO Phylogenomics | Utility script to construct species phylogenies using BUSCO proteins☆58Updated 3 months ago
- Software for painlessly estimating average nucleotide diversity within and between populations☆124Updated 7 months ago
- GET_HOMOLOGUES: a versatile software package for pan-genome analysis☆110Updated last week
- Scripts for analysis used during the course☆85Updated 8 months ago
- Topology weighting by iterative sampling of sub-trees☆73Updated last week
- MitoFinder: efficient automated large-scale extraction of mitogenomic data from high throughput sequencing data☆93Updated 9 months ago
- Automatically exported from code.google.com/p/jmodeltest2☆77Updated 3 years ago
- MITObim - mitochondrial baiting and iterative mapping☆111Updated 4 years ago
- ☆79Updated 3 years ago
- Bioinformatic pipeline for processing Sequence Capture data for Phylogenetics☆21Updated last year
- Automated long-read first bacterial genome assembly tool implemented in Snakemake using Snaketool.☆113Updated last month
- Reference-free profiling of polyploid genomes☆111Updated 6 months ago
- Bayesian analysis of genomic sequence data under the multispecies coalescent model