PlantDr430 / BuscoOrthoPhylo
Wrapper script to concatenate, align, and construct phylogenetic trees of BUSCOs
☆19Updated 5 years ago
Related projects: ⓘ
- Data analysis of Funannotate and Orthofinder outputs to Pangenome results☆16Updated 4 years ago
- ☆36Updated last year
- BUSCOMP: BUSCO Compiler and Comparison tool☆20Updated 6 months ago
- Genome Annotation Pipeline☆28Updated last month
- ☆24Updated 4 months ago
- R package to draw syntenic plots in 3 different styles☆39Updated 9 months ago
- A genome assembly assessment pipeline.☆36Updated 10 months ago
- Chromosome-level synteny plotting using orthologous regions☆26Updated this week
- MITE Tracker: An accurate approach to identify miniature inverted-repeat transposable elements in large genomes☆17Updated 6 months ago
- Gapless provides combined scaffolding, gap-closing and assembly correction with long reads☆32Updated last year
- Reconstruction of ancestral genome maps☆15Updated 6 years ago
- ☆29Updated 3 weeks ago
- MitoDNA extending assembler from NGS data☆18Updated 8 months ago
- ☆16Updated 2 years ago
- Diploid genome assembly analysis tools☆13Updated 4 months ago
- reference-free estimation of ploidy level from whole genome sequencing data based on de Bruijn graph☆16Updated last year
- Easily construct the ML species tree with single-copy gene shared by different species.☆25Updated 5 years ago
- ☆19Updated last month
- ☆27Updated 2 years ago
- MCMCtreeR: A package to estimate distribution values for temporal node constraints and prepare input files for MCMCtree☆41Updated 4 years ago
- A box of genomics tools☆21Updated 4 years ago
- Dinoflagellate Annotation Workflow☆11Updated last year
- STAG: Species Tree from All Genes☆31Updated 5 years ago
- SyntenyFinder contains a collection of scripts to easily perform and visualize macrosynteny analysis when provided with the accessions of…☆17Updated last week
- Domain based annotation of transposable elements☆18Updated 10 months ago
- Convergent substitution detection tool based on the PCOC model☆28Updated 2 years ago
- ☆36Updated last year
- Tree House Explorer (THEx) is a novel genome browser for exploring phylogenetic and genomic data in one succinct place.☆12Updated 7 months ago
- ☆32Updated 3 years ago
- ☆21Updated 5 years ago