Alternatives and similar repositories for HybPhaser

Users that are interested in HybPhaser are comparing it to the libraries listed below

• meganlsmith / delimitR
  This repository contains the code and manual for the R package delimitR.
  ☆17Updated 3 years ago
• FePhyFoFum / SortaDate
  ☆18Updated 4 years ago
• rufimov / ParalogWizard
  ☆13Updated 3 months ago
• esayyari / DiscoVista
  ☆40Updated last year
• nt246 / physalia-lcwgs
  Files for the the Physalia course on Population genomic inference from low-coverage whole-genome sequencing data, Oct 10-13, 2022
  ☆59Updated 8 months ago
• blackrim / treePL
  Phylogenetic penalized likelihood
  ☆49Updated last month
• edgardomortiz / Captus
  Assembly of Phylogenomic Datasets from High-Throughput Sequencing data
  ☆26Updated 3 weeks ago
• Capblancq / RDA-landscape-genomics
  ☆31Updated 3 years ago
• enormandeau / stacks_workflow
  RADseq workflow using STACKS
  ☆57Updated last week
• jasonleebrown / UCE_phyluce_pipeline
  UCE Bioinformatics Pipeline
  ☆16Updated 7 months ago
• melisaolave / SNPs2CF
  An R function to compute Concordance Factors from SNP datasets
  ☆14Updated 6 months ago
• AntonelliLab / seqcap_processor
  Bioinformatic pipeline for processing Sequence Capture data for Phylogenetics
  ☆21Updated 2 years ago
• simonhmartin / twisst
  Topology weighting by iterative sampling of sub-trees
  ☆79Updated 5 months ago
• BenjaminPeter / rangeexpansion
  ☆13Updated 8 years ago
• ribailey / gghybrid
  R package for analysis of hybrids and hybrid zones
  ☆21Updated last year
• mmatschiner / snapp_prep
  Prepare XML input files for divergence-time estimation with SNAPP
  ☆19Updated 2 years ago
• speciationgenomics / speciationgenomics.github.io
  Repository for speciation genomics website
  ☆25Updated 11 months ago
• nstenz / TICR
  ☆26Updated 4 years ago
• pblischak / HyDe
  Hybridization detection using phylogenetic invariants
  ☆47Updated 7 months ago
• rapidspeciation / biodiversity_genomics_course
  biodiversity genomics course by Nicol Rueda, Karin Näsvall and Joana Meier from the Wellcome Sanger Institute
  ☆54Updated 2 weeks ago
• clairemerot / angsd_pipeline
  ☆26Updated 2 years ago
• mossmatters / phyloscripts
  Helper scripts for processing and visualization of phylogenetics datasets
  ☆29Updated last year
• gehara / PipeMaster
  An R Package to build and simulate coalescent models
  ☆20Updated last year
• thierrygosselin / assigner
  Population assignment analysis using R
  ☆17Updated 2 months ago
• mennodejong1986 / SambaR
  SambaR: Snp datA Management and Basic Analyses in R
  ☆28Updated last month
• miriammiyagi / QuIBL
  Quantifying Introgression via Branch Lengths
  ☆52Updated 2 years ago
• mrmckain / Fast-Plast
  Automated de novo assembly of whole chloroplast genomes.
  ☆46Updated 9 months ago
• rbouckaert / starbeast3
  ☆18Updated 9 months ago
• jessicarick / msmc2_scripts
  MSMC2 Scripts
  ☆24Updated last year
• stevemussmann / BayesAss3-SNPs
  Modification of BayesAss 3.0.4 to allow handling of large SNP datasets
  ☆16Updated 3 years ago