HybSeq Target Capture of 353 Protein Coding Genes in Any Angiosperm
☆21Feb 5, 2023Updated 3 years ago
Alternatives and similar repositories for Angiosperms353
Users that are interested in Angiosperms353 are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Recovering genes from targeted sequence capture data☆135Jan 9, 2026Updated 5 months ago
- ☆10Nov 4, 2021Updated 4 years ago
- An R package for predicting ploidal level from sequence data using site-based heterozygosity☆19May 26, 2026Updated 2 weeks ago
- Assembly of Phylogenomic Datasets from High-Throughput Sequencing data☆40Updated this week
- Removing PCR duplicates for sequencing reads.☆14Sep 8, 2020Updated 5 years ago
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- run-length BWT tools for genomic sequences☆19May 19, 2022Updated 4 years ago
- Bioinformatic pipeline for processing Sequence Capture data for Phylogenetics☆24May 30, 2023Updated 3 years ago
- ☆41Jun 8, 2023Updated 3 years ago
- C program for selecting DNA substitution models using PAUP*☆18Mar 24, 2020Updated 6 years ago
- ☆38Apr 13, 2026Updated 2 months ago
- Pipeline for phasing sequence data in polyploids. Designed for target enrichment data, but probably works with other data too.☆12Jun 20, 2024Updated last year
- Genetic maps in autopolyploids☆33Jan 12, 2026Updated 5 months ago
- Detects and blacklists paralog RAD loci analyzed in Stacks or ipyrad, based on the McKinney 2017 method (doi:10.1111/1755-0998.12613)☆10Sep 4, 2019Updated 6 years ago
- Pipelines for analyzing genomic or transcriptomic data☆17Feb 29, 2024Updated 2 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Practical Haplotype Graph (PHG) version 2☆33Updated this week
- An R function to compute Concordance Factors from SNP datasets☆16Dec 4, 2025Updated 6 months ago
- Reconstruct Ancestral State in Phylogenies☆28May 21, 2024Updated 2 years ago
- A framework for simulation-based inference in evolutionary biology☆28Jan 13, 2026Updated 5 months ago
- SNP genotyping in polyploids☆17Aug 12, 2020Updated 5 years ago
- Merging assemblies by using adjacency algebraic model and classification☆22Jun 17, 2023Updated 2 years ago
- The BaitFisher-package is a software package for designing hybrid enrichment probes. For more information see:☆13Oct 20, 2021Updated 4 years ago
- a tool to identify species and inter-species hybrids and chromosome copy number variants from short-read data☆19Sep 13, 2019Updated 6 years ago
- The `awk` script to calculate population stats in VCF files: convenient, simple, flexible☆32May 28, 2026Updated 2 weeks ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- A program for multimodel inference on speciation and trait evolution☆35Sep 4, 2017Updated 8 years ago
- PDLLMs: A group of tailored DNA large language models (LLMs) for analyzing plant genomes☆54Jun 5, 2026Updated last week
- wgd v2: a suite of tools to uncover and date ancient polyploidy and whole-genome duplication☆41May 27, 2026Updated 2 weeks ago
- reference-free estimation of ploidy level from whole genome sequencing data based on de Bruijn graph☆18Jul 26, 2023Updated 2 years ago
- A set of scripts for the assembly of chloroplast genomes out of whole-genome sequencing reads☆12May 2, 2019Updated 7 years ago
- Data and scripts used in the oneKP capstone analyses☆13Apr 5, 2022Updated 4 years ago
- Minimizer-based assembly scaffolding and mapping using long reads☆51Apr 1, 2026Updated 2 months ago
- PhyloSD: Phylogenomic Subgenome Detection pipeline☆11Jun 24, 2022Updated 3 years ago
- This is the Haplotypo repository☆22May 24, 2024Updated 2 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Perl script for manipulating multiple sequence alignments for phylogenetic reconstruction☆11Sep 29, 2014Updated 11 years ago
- Plann: a command-line application for annotating plastome sequences☆12Aug 5, 2022Updated 3 years ago
- ☆81May 2, 2026Updated last month
- Calculate summary statistics and manipulate multiple sequence alignments☆96Jan 28, 2026Updated 4 months ago
- Noise-Cancelling Repeat Finder☆27Apr 2, 2026Updated 2 months ago
- A toolkit for performing set operations - union, intersection and complement - on k-mer lists.☆35Nov 22, 2022Updated 3 years ago
- An accurate and widely applicable pangenome graph-based variant genotyper for diploid and polyploid genomes