mossmatters / Angiosperms353Links
HybSeq Target Capture of 353 Protein Coding Genes in Any Angiosperm
☆19Updated 2 years ago
Alternatives and similar repositories for Angiosperms353
Users that are interested in Angiosperms353 are comparing it to the libraries listed below
Sorting:
- Automated de novo assembly of whole chloroplast genomes.☆46Updated 9 months ago
- PREQUAL: a pre-alignment quality filter for comparative sequence analyses☆32Updated 3 years ago
- This repository provides source code for several pipelines dedicated to the alignment of nucleotide coding sequences that are based on MA…☆34Updated last year
- ASTRAL for PaRalogs and Orthologs☆21Updated 2 years ago
- A statistical framework for ploidy estimation using NGS short-read data☆59Updated 7 years ago
- Alignment-Based Sequence extraction☆15Updated 3 years ago
- Likelihood-based Selective Sweep Detection☆38Updated last year
- MCMCtreeR: A package to estimate distribution values for temporal node constraints and prepare input files for MCMCtree☆45Updated 5 years ago
- Bayesian gene tree reconciliation and WGD inference using amalgamated likelihood estimation☆16Updated last month
- ☆22Updated 11 years ago
- wgd v2: a suite of tools to uncover and date ancient polyploidy and whole-genome duplication☆34Updated 4 months ago
- STAG: Species Tree from All Genes☆34Updated 6 years ago
- A tool to infer species tree and phylogenetic network from multilocus data☆32Updated 4 years ago
- Convergent substitution detection tool based on the PCOC model☆31Updated 3 years ago
- Software for ancestry estimation in unrelated individuals☆20Updated 2 weeks ago
- Bayesian molecular clock dating tutorial with genome-scale datasets☆19Updated 3 years ago
- Framework for analyzing low depth NGS data in heterogeneous populations using PCA.☆51Updated last month
- Detects Outliers and plots genomic clines from BGC output, and extends the plotting functionality of INTROGRESS to Correlate genomic clin…☆16Updated 8 months ago
- Tutorials on phylogenomic analyses for the ForBio Phylogenomics course☆37Updated last year
- ☆40Updated last year
- A program for the Maximum-likelihood analysis of population genomic data.☆28Updated 4 years ago
- ☆16Updated 4 years ago
- Population genetics analyses from NGS data☆25Updated 4 years ago
- A box of genomics tools☆21Updated 4 years ago
- Alignment-based retrieval and concatenation of phylogenetic markers from whole genome sequence (WGS) data☆36Updated last year
- Detecting natural selection from population-based genetic data☆27Updated 6 years ago
- Repository for speciation genomics website☆25Updated 11 months ago
- ☆32Updated 4 years ago
- A tool to identify and annotate homoplasies on a phylogeny and sequence alignment☆20Updated 4 years ago
- Leroy & Rougemont - “learning-by-doing” introduction to population genomics - scripts☆20Updated 5 years ago