FePhyFoFum / SortaDateLinks
☆18Updated 5 years ago
Alternatives and similar repositories for SortaDate
Users that are interested in SortaDate are comparing it to the libraries listed below
Sorting:
- Code for computing various support scores for internodes☆19Updated 5 years ago
- Helper scripts for processing and visualization of phylogenetics datasets☆30Updated last year
- ☆43Updated 2 years ago
- Quartet Sampling method for phylogenetic branch support evaluation☆19Updated last year
- Perl script for manipulating multiple sequence alignments for phylogenetic reconstruction☆11Updated 11 years ago
- Tutorials on phylogenomic analyses for the ForBio Phylogenomics course☆38Updated last year
- Alignment-Based Sequence extraction☆15Updated 3 years ago
- A tool to infer species tree and phylogenetic network from multilocus data☆32Updated 5 years ago
- DFOIL: Introgression Testing for Five Taxa☆33Updated 4 years ago
- This repository provides source code for several pipelines dedicated to the alignment of nucleotide coding sequences that are based on MA…☆36Updated 2 weeks ago
- A tool to identify and annotate homoplasies on a phylogeny and sequence alignment☆21Updated 4 years ago
- Phylogenetic penalized likelihood☆54Updated 6 months ago
- ☆13Updated 10 months ago
- Quantifying Introgression via Branch Lengths☆56Updated 3 years ago
- Automated de novo assembly of whole chloroplast genomes.☆47Updated last year
- MCMCtreeR: A package to estimate distribution values for temporal node constraints and prepare input files for MCMCtree☆45Updated 6 years ago
- Materials for genome annotation sessions at the WORKSHOP ON GENOMICS, CESKY KRUMLOV☆17Updated this week
- Alignment-based retrieval and concatenation of phylogenetic markers from whole genome sequence (WGS) data☆36Updated last year
- ☆22Updated 11 years ago
- This repository contains the code and manual for the R package delimitR.☆17Updated 3 years ago
- Prepare XML input files for divergence-time estimation with SNAPP☆19Updated 3 years ago
- Topology weighting by iterative sampling of sub-trees☆82Updated last year
- R and Python scripts used to simulate gene trees under coalescent model and detect gene flow using triple frequency☆15Updated 3 years ago
- Two-dimensional outlier detection algorithm for pinpointing errors in small species-specific stretches of the multiple sequence alignment…☆16Updated last year
- identify potential non-animal transcripts in animal transcriptomes☆11Updated 5 years ago
- SambaR: Snp datA Management and Basic Analyses in R☆32Updated 3 months ago
- Hybridization detection using phylogenetic invariants☆52Updated last year
- ☆32Updated this week
- Workflow to detect and phase hybrids in target capture data☆20Updated 2 years ago
- A massively parallel tool for model selection and tree inference on thousands of genes☆51Updated last year