md5sam / Falcon2FastgLinks
Falcon2Fastg is a tool for converting a FALCON assembly to FASTG format to visualize with Bandage
☆13Updated 9 years ago
Alternatives and similar repositories for Falcon2Fastg
Users that are interested in Falcon2Fastg are comparing it to the libraries listed below
Sorting:
- base-accurate DNA sequence alignments using edlib and mashmap2☆32Updated 4 years ago
- Annotated Genome Optimization Using Transcriptome Information☆20Updated 5 years ago
- Code to create a PRG from a Multiple Sequence Alignment file☆25Updated 3 months ago
- Improved Phased Assembler☆28Updated 3 years ago
- CAMSA: a tool for Comparative Analysis and Merging of Scaffold Assemblies☆24Updated 5 years ago
- NaS is a hybrid approach developped to take advantage of data generated using MinION device. We combine Illumina and Oxford Nanopore tech…☆15Updated 8 years ago
- Some simple scripts to ease management and local basecalling of millions of FAST5 files☆25Updated 8 years ago
- Lift-over alignments from variant-aware references☆34Updated 2 years ago
- A draft genome scaffolder that uses multiple reference genomes in a graph-based approach.☆45Updated 4 years ago
- ♥ Efficient Estimation of Evolutionary Distances☆47Updated last year
- ☆35Updated 5 years ago
- Scaffolding with Ultralong Reads☆15Updated 5 years ago
- This repository is deprecated, please use the link to the right.☆23Updated 7 years ago
- ☆21Updated 6 years ago
- Fast and accurate tool for estimating genomic distances between genome-skims☆45Updated 2 years ago
- Python wrapper for wavefront alignment using WFA2-lib☆37Updated last year
- Assembler for raw de novo genome assembly of long uncorrected reads.☆36Updated 6 years ago
- scripts to parse IrysView output☆11Updated 10 years ago
- ☆26Updated 7 years ago
- Colinear block visualisation tool☆31Updated last year
- ☆15Updated 5 years ago
- GFA insert into GenomicSQLite☆49Updated 4 years ago
- Scaffolding genomes using synthetic long read clouds☆20Updated 9 years ago
- Software that separates very close sequences that have been collapsed during assembly. Uses only long reads.☆35Updated 7 months ago
- An algorithm for centromere assembly using long error-prone reads☆25Updated 4 years ago
- The Modular Aligner and The Modular SV Caller☆46Updated 2 years ago
- Differential k-mer analysis☆39Updated last year
- Graph based multi genome aligner☆49Updated 4 years ago
- ☆26Updated 6 years ago
- compare sequences to a shared root reference sequence.☆24Updated 4 years ago