Pipeline for Evaluating Prokaryotic References
☆11Sep 16, 2016Updated 9 years ago
Alternatives and similar repositories for pepr
Users that are interested in pepr are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Tool (experimental) to compute layout from overlaps with spectral algorithm☆11Nov 28, 2017Updated 8 years ago
- scripts to parse IrysView output☆11Jun 24, 2015Updated 10 years ago
- Scaffolding of genomic assemblies with RNA seq data☆15Oct 8, 2015Updated 10 years ago
- Accurate and fast taxonomic classification using pseudoaligning☆21Sep 16, 2017Updated 8 years ago
- A pipeline for extracting SSU rRNA gene from wgs data and applying them for further diversity analysis☆10Jan 30, 2016Updated 10 years ago
- Bare Metal GPUs on DigitalOcean Gradient AI • AdPurpose-built for serious AI teams training foundational models, running large-scale inference, and pushing the boundaries of what's possible.
- Demonstrating the PRoot program☆11Jul 29, 2016Updated 9 years ago
- Pipeline for poreathon☆14Dec 17, 2014Updated 11 years ago
- Ococo: the first online variant and consensus caller. Call genomic consensus directly from an unsorted SAM/BAM stream.☆46Jan 18, 2019Updated 7 years ago
- The BTL C/C++ Common bloom filters for bioinformatics projects, as well as any APIs created for other programming languages.☆18Feb 26, 2022Updated 4 years ago
- A succinct colored dBG representation☆12Sep 11, 2018Updated 7 years ago
- Northern Arizona SNP Pipeline☆20Oct 29, 2024Updated last year
- Accurate, Lightweight Clustering of de novo Transcriptomes using Fragment Equivalence Classes☆31Jun 16, 2024Updated last year
- An Illumina PE genome contig assembler, can handle large (17Gbp) complex (hexaploid) genomes.☆46Nov 25, 2022Updated 3 years ago
- Comparing and combining multiple metagenomic datasets☆16Oct 12, 2022Updated 3 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- ☆24Jan 25, 2024Updated 2 years ago
- Fast approximation of similarity for sets of very different sizes☆20Mar 8, 2022Updated 4 years ago
- This repo is DEPRECATED. Please use minimap2, the successor of minimap.☆106Sep 20, 2017Updated 8 years ago
- A Python wrapper for the bbhash library for Minimal Perfect Hashing☆19Oct 26, 2025Updated 7 months ago
- ☆20Jan 12, 2017Updated 9 years ago
- MicroPheno Project☆12Oct 21, 2022Updated 3 years ago
- Software accompanying "HINGE: Long-Read Assembly Achieves Optimal Repeat Resolution"☆64Oct 15, 2020Updated 5 years ago
- Improved multi-sample transcript abundance estimates using adaptive priors☆20Oct 29, 2018Updated 7 years ago
- Layout module for raw de novo genome assembly of long uncorrected reads.