Alternatives and similar repositories for DASCRUBBER:

Users that are interested in DASCRUBBER are comparing it to the libraries listed below

• PacificBiosciences / apps-scripts
  Miscellaneous scripts for applications of PacBio systems
  ☆27Updated 2 years ago
• PacificBiosciences / pbipa
  Improved Phased Assembler
  ☆28Updated 2 years ago
• UCSC-nanopore-cgl / MarginPolish
  MarginPolish: Graph based assembly polishing
  ☆46Updated 4 years ago
• schatzlab / crossstitch
  Code for phasing SVs with SNPs
  ☆52Updated 4 years ago
• wtsi-hpag / Scaff10X
  Pipeline for scaffolding and breaking a genome assembly using 10x genomics linked-reads
  ☆22Updated 2 years ago
• dfguan / asset
  assembly evaluation tool
  ☆34Updated 2 years ago
• vgteam / sv-genotyping-paper
  ☆30Updated 5 years ago
• DovetailGenomics / HiRise_July2015_GR
  test repository
  ☆29Updated last year
• mcfrith / tandem-genotypes
  ☆48Updated 7 months ago
• zeeev / smartie-sv
  calling SVs from Blasr contig level alignments
  ☆54Updated 6 years ago
• compbiol / CAMSA
  CAMSA: a tool for Comparative Analysis and Merging of Scaffold Assemblies
  ☆24Updated 4 years ago
• mdcao / npScarf
  ☆26Updated 5 years ago
• lbcb-sci / ra
  Assembler for raw de novo genome assembly of long uncorrected reads.
  ☆37Updated 5 years ago
• kakitone / finishingTool
  finshingTool
  ☆55Updated 8 years ago
• stat-lab / MOPline
  Detection and genotyping of structural variants
  ☆18Updated 2 weeks ago
• RolandFaure / Hairsplitter
  Software that separates very close sequences that have been collapsed during assembly. Uses only long reads.
  ☆34Updated 2 months ago
• Nucleomics-VIB / bionano-tools
  Custom tools to 'facilitate' BioNano Genomics data analysis
  ☆33Updated 6 years ago
• wen-biao / OM-HiC-scaffolding
  Workflows for correcting and scaffolding long-read (PacBio, nanopore) genome assemblies using optical mapping and/or Dovetail Hi-C data
  ☆20Updated 4 years ago
• lh3 / htsbox
  My experimental tools on top of htslib. NOT OFFICIAL!!!
  ☆54Updated last year
• jbelyeu / SV-plaudit
  Pipeline for structural variant image curation and analysis.
  ☆48Updated 3 years ago
• arnederoeck / NanoSatellite
  Dynamic time warping of Oxford Nanopore squiggle data to characterize tandem repeats.
  ☆31Updated 4 years ago
• AppliedBioinformatics / runBNG
  An easy way to run BioNano genomic analysis
  ☆27Updated 3 years ago
• shingocat / lrscaf
  TGS scaffolding
  ☆46Updated 3 years ago
• Nextomics / nextsv
  ☆33Updated 10 months ago
• benedictpaten / marginPhase
  ☆35Updated 5 years ago
• HuffordLab / GenomeQC
  ☆32Updated 4 years ago
• EichlerLab / svpop
  Variant annotation and merging pipeline
  ☆31Updated last month
• uio-cels / NucDiff
  In-depth characterization and annotation of differences between two sets of DNA sequences
  ☆60Updated 4 years ago
• uio-bmi / two_step_graph_mapper
  ☆21Updated 5 years ago
• mrvollger / SDA
  Segmental Duplication Assembler (SDA).
  ☆44Updated last year