Software for Nanopore Analysis
☆10Mar 14, 2018Updated 8 years ago
Alternatives and similar repositories for npAnalysis
Users that are interested in npAnalysis are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Read nanopore sequence reads in real-time☆14Feb 9, 2017Updated 9 years ago
- Nanopore read de-multiplexer☆13Mar 25, 2020Updated 6 years ago
- De novo assembly of nanopore reads using nextflow☆20Aug 5, 2020Updated 5 years ago
- Analysis pipeline for functional metagenomic sequencing data obtained using nanopore sequencing☆12Nov 20, 2016Updated 9 years ago
- A tool to examine duplicate read characteristics in a BAM file☆12Dec 8, 2017Updated 8 years ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- MUMmer for HPC☆18Jan 7, 2013Updated 13 years ago
- A comprehensive toolkit for running Oxford Nanopore's MinION☆12Oct 11, 2018Updated 7 years ago
- ASMNGS18 - 2018 Conference Details☆12Oct 3, 2018Updated 7 years ago
- Reproducibility workflow for Gigante et al., 2018: Using long-read sequencing to detect imprinted DNA methylation☆23Mar 4, 2019Updated 7 years ago
- INC-Seq: Accurate single molecule reads using nanopore sequencing☆16Sep 11, 2020Updated 5 years ago
- ☆23Jan 18, 2026Updated 6 months ago
- ☆18Mar 5, 2017Updated 9 years ago
- ☆26Oct 31, 2019Updated 6 years ago
- ☆18Nov 16, 2015Updated 10 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Generate mutated sequence files from a reference genome.☆11Jun 12, 2026Updated last month
- Contig Ploidy and Allele Dosage Estimation☆11Oct 30, 2015Updated 10 years ago
- Fast and Accurate Classification of Sequences using Bloom filters☆16Apr 19, 2023Updated 3 years ago
- A tool to easily create informative genomic feature plots☆17Dec 26, 2022Updated 3 years ago
- FinalVersions☆17Apr 3, 2017Updated 9 years ago
- Concordance between variant callers☆17Nov 27, 2014Updated 11 years ago
- Additional tools for analyzing Oxford Nanopore minION data☆17Jul 24, 2015Updated 10 years ago
- Edinburgh Genomics MinION training 2016☆33Oct 26, 2016Updated 9 years ago
- A python script used to annotate genomic intervals.☆18May 29, 2020Updated 6 years ago
- Simple, predictable pricing with DigitalOcean hosting • AdAlways know what you'll pay with monthly caps and flat pricing. Enterprise-grade infrastructure trusted by 600k+ customers.
- ☆11Mar 10, 2024Updated 2 years ago
- Various scripts and recipes for working with nanopore data☆35Apr 17, 2016Updated 10 years ago
- Software for nanopore data analysis☆29Sep 10, 2014Updated 11 years ago
- An example of a data analysis pipeline using Make☆17Jul 26, 2016Updated 9 years ago
- Fast Structural Variation Detection Toolbox☆19Feb 16, 2015Updated 11 years ago
- Some simple scripts to ease management and local basecalling of millions of FAST5 files☆25Nov 25, 2017Updated 8 years ago
- Whole genome focused array SNP typer☆14Feb 2, 2026Updated 5 months ago
- Pipeline for Illumina shotgun sequencing of 16S rRNA amplicon sequences☆14Sep 2, 2016Updated 9 years ago
- Real-time species-typing visualisation for nanopore data.☆12Apr 11, 2023Updated 3 years ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- Scrappie is a technology demonstrator for the Oxford Nanopore Research Algorithms group☆94Jan 13, 2022Updated 4 years ago
- variant integration methods for the 1000 Genomes Project☆21Jan 16, 2018Updated 8 years ago
- A support vector machine for calling variants from next-gen sequencing data☆15Dec 12, 2013Updated 12 years ago
- An MPI Toolkit for large-scale genomic analysis☆16Feb 29, 2016Updated 10 years ago
- Correction of palindromes in long reads from PacBio and Nanopore☆14Mar 1, 2022Updated 4 years ago
- Interactive, web tool for exploring pan-genome of bacterial strains☆50Jan 14, 2026Updated 6 months ago
- Comprehensive resistance detection from WGS data☆20Jun 4, 2026Updated last month