BioinformaticsSpring2015 / BioinformaticsMaterials
Syllabus and materials for bioinformatics lecture + lab
☆21Updated 10 years ago
Alternatives and similar repositories for BioinformaticsMaterials:
Users that are interested in BioinformaticsMaterials are comparing it to the libraries listed below
- Converts Prokka GFF3 files to EMBL files for uploading annotated assemblies to EBI☆29Updated 6 years ago
- Advanced metagenomic Sequence Analysis in R☆15Updated 6 years ago
- A collection of modules and sub-workflows for Nextflow☆26Updated 2 weeks ago
- Pipeline for structural variant image curation and analysis.☆48Updated 3 years ago
- Merge transcriptome assemblies☆31Updated 8 years ago
- Exact Tandem Repeat Finder (not a TRF replacement)☆49Updated 5 years ago
- Assembler for raw de novo genome assembly of long uncorrected reads.☆37Updated 5 years ago
- The final version 2 release of our software to detect core genes in eukaryotic genomes☆28Updated 10 years ago
- adds sample names and read-group (RG) tags to BAM alignments☆52Updated 4 years ago
- A tool to reduce the size of Oxford Nanopore Technologies' datasets without losing information☆31Updated last year
- Population-wide Deletion Calling☆35Updated last week
- Nextflow basic tutorial for newbie users☆33Updated 6 years ago
- Maximum likelihood demultiplexing☆47Updated 2 months ago
- Tools for making blobplots or Taxon-Annotated-GC-Coverage plots (TAGC plots) to visualise the contents of genome assembly data sets as a …☆46Updated 2 years ago
- A pipeline for preprocessing NGS data from Illumina, Nanopore and PacBio technologies☆34Updated 9 months ago
- Metagenomic profiling and phylogenetic distances via common kmers☆42Updated 3 years ago
- Hitting associations with k-mers☆45Updated 2 years ago
- Homebrew formulae for bioinformatics software only available for Linux☆27Updated 5 years ago
- Benchmark pipeline for Structural Variation analyses, funded by the ALLBio.☆24Updated 10 years ago
- Multi-sample genome coverage viewer to observe large, coverage-based anomalies alongside annotations and sample metadata☆56Updated 3 years ago
- ☆10Updated 12 years ago
- ☆20Updated 4 years ago
- Adapters for trimming☆30Updated 6 years ago
- ☆19Updated last year
- Relative Abundance of Transcripts: An R package for the detection of Differential Transcript isoform Usage.☆34Updated 2 years ago
- Remove primer sequence from BAM alignments by soft-clipping☆31Updated 5 years ago
- Adapter trimming and virtual library creation for Illumina Nextera Mate Pair libraries.☆54Updated 6 years ago
- A tiny package manager for crucial unix and bioinformatics tools☆27Updated 9 years ago
- Assembly by Reduced Complexity (ARC)☆41Updated 9 years ago
- full taxonomer cython repository☆22Updated 5 years ago