Alternatives and similar repositories for BioinformaticsMaterials

Users that are interested in BioinformaticsMaterials are comparing it to the libraries listed below

• Oshlack / Lace
  Building SuperTranscripts: A linear representation of transcriptome data
  ☆67Updated 4 years ago
• MVesuviusC / primerTree
  PrimerTree: Visually Assessing the Specificity and Informativeness of Primer Pairs
  ☆52Updated last year
• Askarbek-orakov / ASAR
  Advanced metagenomic Sequence Analysis in R
  ☆15Updated 7 years ago
• sanger-pathogens / gff3toembl
  Converts Prokka GFF3 files to EMBL files for uploading annotated assemblies to EBI
  ☆29Updated 6 years ago
• frankMusacchia / Annocript
  Annocript is a pipeline for the annotation of de-novo generated transcriptomes. It executes BLAST analysis with UniProt, NCBI Conserved …
  ☆56Updated 5 years ago
• conchoecia / pauvre
  Pauvre: QC and genome browser plotting Oxford Nanopore and PacBio long reads.
  ☆54Updated 9 months ago
• biocorecrg / BioNextflow
  A collection of modules and sub-workflows for Nextflow
  ☆27Updated this week
• peterjc / picobio
  Miscellaneous Bioinformatics scripts etc mostly in Python
  ☆45Updated this week
• wdecoster / nano-snakemake
  A snakemake pipeline for SV analysis from nanopore genome sequencing
  ☆51Updated 5 years ago
• hsgweon / pipits
  Automated pipeline for analyses of fungal ITS from the Illumina
  ☆31Updated 4 months ago
• grenaud / deML
  Maximum likelihood demultiplexing
  ☆47Updated 6 months ago
• alexiswl / poreduck
  A comprehensive toolkit for running Oxford Nanopore's MinION
  ☆12Updated 6 years ago
• edamame-course / 2015-tutorials
  tutorials for 2015 EDAMAME
  ☆24Updated 8 years ago
• jgurtowski / nanocorr
  Error correction for Oxford Nanopore data
  ☆47Updated 4 years ago
• blaxterlab / blobology
  Tools for making blobplots or Taxon-Annotated-GC-Coverage plots (TAGC plots) to visualise the contents of genome assembly data sets as a …
  ☆47Updated 3 years ago
• ukhsa-collaboration / PHEnix
  Public Health England SNP calling pipeline.
  ☆37Updated 7 years ago
• LynchLab / MAPGD
  A program for the Maximum-likelihood analysis of population genomic data.
  ☆29Updated 4 years ago
• mw55309 / Kraken_db_install_scripts
  Updated Kraken DB install scripts to cope with new-ish NCBI structure
  ☆47Updated 8 years ago
• eclarke / swga
  Select primer sets for selective whole genome amplification (SWGA)
  ☆32Updated 6 years ago
• rdpstaff / classifier
  RDP extensible sequence classifier for fungal lsu, bacterial and archaeal 16s
  ☆58Updated 2 years ago
• zibraproject / zika-pipeline
  The Zika bioinformatics pipeline
  ☆35Updated 5 years ago
• bhattlab / bhattlab_workflows
  Computational workflows for metagenomics tasks, by the Bhatt lab
  ☆47Updated 2 years ago
• davidebolo1993 / NanoR
  Nanopore data analysis in R
  ☆40Updated 2 years ago
• mw55309 / EG_MinION_2016
  Edinburgh Genomics MinION training 2016
  ☆33Updated 8 years ago
• fhcrc / seqmagick
  An imagemagick-like frontend to Biopython SeqIO
  ☆116Updated last year
• mw55309 / poRe_docs
  ☆17Updated 7 years ago
• lh3 / bfc
  High-performance error correction for Illumina resequencing data
  ☆72Updated 9 years ago
• merenlab / illumina-utils
  A library and collection of scripts to work with Illumina paired-end data (for CASAVA 1.7+ pipeline).
  ☆92Updated last year
• Cibiv / Teaser
  A tool to benchmark mappers and different parameters within minutes
  ☆44Updated 6 years ago
• thackl / minidot
  Fast and pretty dotplots for whole genomes assemblies using minimap and R/ggplot2
  ☆76Updated 9 years ago