ZJUFanLab / CellTalkDBLinks
A manually curated database of literature-supported ligand-receptor interactions in human and mouse
☆30Updated last year
Alternatives and similar repositories for CellTalkDB
Users that are interested in CellTalkDB are comparing it to the libraries listed below
Sorting:
- Coarse-graining of large single-cell RNA-seq data into metacells☆90Updated 5 months ago
- A unified interface to spatial transcriptomics deconvolution tools☆45Updated 3 weeks ago
- Gene regulatory network containing signed transcription factor-target gene interactions☆91Updated 6 months ago
- ☆41Updated 4 years ago
- scWGCNA☆61Updated 3 years ago
- ☆50Updated 5 years ago
- SIB/Scilifelab autumn school in single cell omics 2019.☆22Updated 6 years ago
- Aligning gene expression trajectories of single-cell reference and query systems☆77Updated 3 months ago
- FastIntegrate integrates thousands of scRNA-seq datasets and outputs batch-corrected values for downstream analysis☆23Updated last year
- R package for Bioconductor submission☆37Updated 2 years ago
- an integrative analysis tool for analysing large-scale single cell RNA-sequencing data☆36Updated 2 years ago
- Cluster Identity Predictor (R package implementation)☆20Updated 3 years ago
- R package expanding integrative analysis capabilities of Seurat by providing seamless access to popular integration methods and to an int…☆31Updated 3 months ago
- Single-cell Case Control Analysis☆52Updated this week
- Infer Copy Number Alterations and Clonality in (Single-Cell) RNA-Seq Data☆44Updated last year
- Robust identification of perturbed cell types in single-cell RNA-seq data☆34Updated 3 weeks ago
- Generate masks for scRNA-seq clusters on t-SNE or UMAP plots☆38Updated last week
- cell type deconvolution for multi-condition bulk RNA-seq data☆29Updated 3 years ago
- Single cell RNA-seq analysis bundle☆37Updated 6 years ago
- R package for specialised analysis of single cell data☆40Updated 3 years ago
- ☆60Updated 3 months ago
- Nuclear fraction QC metric to detect empty droplets and damaged cells in scRNA-seq data☆40Updated 4 years ago
- scGSVA: Perform GSVA for single cell RNA seq☆67Updated last year
- Trajectory inference across multiple conditions with condiments: differential topology, progression, differentiation, and expression☆29Updated last year
- Repository for the building, sharing and editing of scRNAseq pipelines for the Lung Cell Atlas☆39Updated 4 years ago
- R package for robust clustering of single cell RNA sequencing data☆36Updated last year
- Code used to run the data analysis in the hdWGCNA manuscript (Morabito et al 2022)☆17Updated 2 years ago
- Mosaic single cell data integration using non-overlapping features☆37Updated 3 years ago
- A R package for integrated scRNA-seq data analysis using the RPCI algorithm☆44Updated last year
- ☆32Updated 10 months ago