gandallab / devBrain_xQTLLinks
☆10Updated 2 months ago
Alternatives and similar repositories for devBrain_xQTL
Users that are interested in devBrain_xQTL are comparing it to the libraries listed below
Sorting:
- PredictDB Pipeline for GTEx v7 data☆17Updated 2 years ago
- GWAS genetics Fine-mapping method☆24Updated 9 months ago
- ☆23Updated 6 months ago
- Analysis pipelines for QTL discovery and GWAS signals interpretation☆9Updated 10 months ago
- This software tool implements the OPERA (omics pleiotropic association) method to test for combinatorial pleiotropic associations of mole…☆36Updated 9 months ago
- single cell and bulk RNASeq analysis scripts☆12Updated 3 years ago
- ☆11Updated last year
- A method which leverages scRNA-seq data to achieve two goals: (1) to infer the cell types in which the disease-associated genes manifest …☆25Updated 2 years ago
- ☆23Updated 3 years ago
- SCALLOP-INF analysis☆20Updated 10 months ago
- Pipeline for multiplex computing of statistical colocalization via COLOC between GWAS and QTL data.☆18Updated 2 years ago
- Create Regional Association Plots☆12Updated 11 months ago
- xQTLbiolinks: an R package for integrative analysis with xQTL data☆17Updated last year
- Fine-mapping with infinitesimal effects☆16Updated last month
- ☆16Updated 2 years ago
- TWAS-pipeline☆22Updated 4 years ago
- 🌓 Allele specific analyses across cell states and conditions☆10Updated 2 years ago
- A comprehensive pipeline for post-GWAS analysis leveraging diverse types of omics data☆29Updated 2 years ago
- harmonization, liftover, and imputation of summary statistics from GWAS☆33Updated 4 years ago
- Integration of TWAS and Colocalization Analysis☆17Updated 8 months ago
- Code supporting analyses in paper on fine-mapping AD loci☆15Updated 4 years ago
- Open4Gene, A Hurdle Model-based Method for Peak-to-Gene Linkage Analysis☆12Updated last week
- scripts for the integrating ATAC-seq, RNA-seq and CHi-C paper☆24Updated 2 years ago
- ☆20Updated 8 months ago
- Quality control steps for GWAS☆23Updated last year
- STAR, cufflinks, cluster, DESeq2, GO analysis☆14Updated 5 years ago
- An R package for plotting GWAS results from the GAPIT package☆12Updated 2 weeks ago
- Scripts for plotting figures and running analysis throughout the manuscript☆11Updated 3 years ago
- Assessing enrichment of complex disease or trait associations among QTLs☆15Updated 5 years ago
- R package for tissue-specific gene enrichment☆14Updated 3 years ago