Alternatives and similar repositories for comparative_epigenomic_motor_cortex

Users that are interested in comparative_epigenomic_motor_cortex are comparing it to the libraries listed below

• aertslab / scATAC-seq_benchmark

  View on GitHub
  ☆19Dec 15, 2023Updated 2 years ago
• theislab / gastrulation_analysis

  View on GitHub
  ☆10Jun 25, 2021Updated 4 years ago
• theislab / cellrank2_reproducibility

  View on GitHub
  CellRank 2's reproducibility repository.
  ☆15Sep 4, 2024Updated last year
• MarioniLab / CELLOseq

  View on GitHub
  Transposable element expression at unique loci in single cells with CELLO-seq
  ☆11Jun 17, 2024Updated last year
• epigen / scifiRNA-seq_publication

  View on GitHub
  The million-scale method for single-cell analysis
  ☆10Jul 6, 2023Updated 2 years ago
• yal054 / epiformer

  View on GitHub
  ☆27Apr 15, 2025Updated 9 months ago
• ZhuangLab / whole_mouse_brain_MERFISH_atlas_scripts_2023

  View on GitHub
  ☆13Mar 29, 2024Updated last year
• cantinilab / scPRINT-old1

  View on GitHub
  Single Cell Pretrained Regulatory network INference from Transcripts
  ☆11Sep 17, 2024Updated last year
• DHUDBlab / IGEGRNS

  View on GitHub
  ☆11Jan 12, 2024Updated 2 years ago
• myylee / benchmark_sc_multiomic_integration

  View on GitHub
  ☆10Oct 12, 2023Updated 2 years ago
• gao-lab / LOST_and_FOUND

  View on GitHub
  ☆13Apr 7, 2023Updated 2 years ago
• beyondpie / CEMBA_wmb_snATAC

  View on GitHub
  Whole mouse brain snATAC seq analysis
  ☆29Apr 18, 2025Updated 9 months ago
• epigen / scifiRNA-seq

  View on GitHub
  ☆12Dec 7, 2020Updated 5 years ago
• Blairewen / Arabidopsis-Pollen

  View on GitHub
  ☆15Jan 28, 2023Updated 3 years ago
• neurogenomics / EnformerCelltyping

  View on GitHub
  Enformer Celltyping is a tensorflow, multi-headed attention based model that incorporates distal effects of Deoxyribonucleic Acid (DNA) i…
  ☆15Jun 25, 2025Updated 7 months ago
• phipsonlab / SuperCellCyto

  View on GitHub
  SuperCell for Cytometry data
  ☆13Oct 14, 2025Updated 4 months ago
• GreenleafLab / scScalpChromatin

  View on GitHub
  ☆30Sep 22, 2023Updated 2 years ago
• dhglab / Broad-transcriptomic-dysregulation-across-the-cerebral-cortex-in-ASD

  View on GitHub
  Code accompanying the manuscript "Broad transcriptomic dysregulation across the cerebral cortex in ASD".
  ☆13Aug 10, 2022Updated 3 years ago
• liulab-dfci / TRUST4_manuscript_evaluation

  View on GitHub
  TRUST4 manuscript evaluation
  ☆16Jul 8, 2022Updated 3 years ago
• calico / borzoi-paper

  View on GitHub
  Analyses related to the Borzoi paper.
  ☆25Dec 14, 2025Updated 2 months ago
• Teichlab / limbcellatlas

  View on GitHub
  This repository contains codes used for the human fetal limb cell atlas.
  ☆17Jan 28, 2025Updated last year
• shishenyxx / Adult_brain_somatic_mosaicism

  View on GitHub
  This repository collects pipelines, codes, and some intermediate results for adult brain somatic mosaicism study.
  ☆15Jun 14, 2025Updated 7 months ago
• AllenInstitute / scrattch.bigcat

  View on GitHub
  iterative clustering pipeline of big single cell datasets.
  ☆36Sep 5, 2025Updated 5 months ago
• lueckenlab / single-cell-papers-trends

  View on GitHub
  Trends in single cell papers
  ☆16Sep 23, 2024Updated last year
• marcovito / sma

  View on GitHub
  ☆15Aug 17, 2023Updated 2 years ago
• bowang-lab / OCAT

  View on GitHub
  ☆18Oct 22, 2024Updated last year
• BICCN / CellCensusMotorCortex

  View on GitHub
  Resources associated with "A multimodal cell census and atlas of the mammalian primary motor cortex"
  ☆21Jul 16, 2021Updated 4 years ago
• Coolgenome / PDAC

  View on GitHub
  ☆25Feb 20, 2025Updated 11 months ago
• guigolab / grape-nf

  View on GitHub
  An automated RNA-seq pipeline using Nextflow
  ☆37Dec 17, 2025Updated last month
• goodarzilab / SwitchFinder

  View on GitHub
  ☆20Jul 16, 2024Updated last year
• brianpenghe / python-genomics

  View on GitHub
  A set of files to do genomics analysis on python
  ☆18Jun 5, 2025Updated 8 months ago
• PoolLab / ReferenceEnhancer

  View on GitHub
  ☆20Sep 8, 2023Updated 2 years ago
• liu-bioinfo-lab / EPCOT

  View on GitHub
  ☆26Nov 7, 2023Updated 2 years ago
• AllenCell / aics-shparam

  View on GitHub
  ☆22May 1, 2025Updated 9 months ago
• swaruplab / Single-nuclei-epigenomic-and-transcriptomic-landscape-in-Alzheimer-disease

  View on GitHub
  Single-nuclei RNA-seq and ATAC-seq in Alzheimer's disease
  ☆96Jul 1, 2021Updated 4 years ago
• LappalainenLab / lorals_paper_code

  View on GitHub
  ☆27May 8, 2022Updated 3 years ago
• aertslab / PUMATAC

  View on GitHub
  Pipeline for Universal Mapping of ATAC-seq
  ☆25Sep 23, 2025Updated 4 months ago
• vagarwal87 / saluki_paper

  View on GitHub
  Saluki, a method to predict mRNA half-lives from sequence
  ☆27Oct 7, 2022Updated 3 years ago
• gkudla / hyb

  View on GitHub
  hyb: a bioinformatics pipeline for the analysis of CLASH (crosslinking, ligation and sequencing of hybrids) data
  ☆13Jul 12, 2024Updated last year